STRINGSTRING
Bsel_0573 Bsel_0573 Bsel_2000 Bsel_2000 Bsel_2620 Bsel_2620 Bsel_3106 Bsel_3106 Bsel_3107 Bsel_3107
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bsel_0573PFAM: Amidase; KEGG: hypothetical protein LOC100240917; Belongs to the amidase family. (391 aa)
Bsel_2000PFAM: Amidase; KEGG: dol:Dole_2535 amidase; Belongs to the amidase family. (500 aa)
Bsel_2620PFAM: Amidase; KEGG: ilo:IL1971 amidase. (483 aa)
Bsel_3106PFAM: coenzyme A transferase; KEGG: bxe:Bxe_B1889 putative glutaconate CoA-transferase, subunit B. (242 aa)
Bsel_3107PFAM: coenzyme A transferase; KEGG: bpt:Bpet3678 putative glutaconate CoA transferase subunit A. (278 aa)
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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