STRINGSTRING
Bsel_1605 Bsel_1605 Bsel_2011 Bsel_2011 Bsel_2044 Bsel_2044 Bsel_2254 Bsel_2254 Bsel_2781 Bsel_2781 Bsel_3191 Bsel_3191
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bsel_1605KEGG: bba:Bd0778 dihydrolipoamide dehydrogenase, E3 subunit; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (469 aa)
Bsel_2011PFAM: aminotransferase class IV; KEGG: tgr:Tgr7_2706 D-amino-acid transaminase. (283 aa)
Bsel_20442-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (421 aa)
Bsel_2254KEGG: pla:Plav_3138 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A. (475 aa)
Bsel_2781PFAM: Aldehyde Dehydrogenase; KEGG: sat:SYN_00265 NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (457 aa)
Bsel_3191TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bgl:bglu_1g14720 thiolase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
Your Current Organism:
Bacillus selenitireducens
NCBI taxonomy Id: 439292
Other names: Bacillus selenitireducens MLS10, [. selenitireducens MLS10, [Bacillus] selenitireducens MLS10
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