(20 nodes) Mixed, incl. Pyrimidine metabolism, and Creatininase activity network (Ochrobactrum anthropi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Oant_0343	PFAM: NMT1/THI5 like domain protein; KEGG: sme:SMc01827 hypothetical protein. (332 aa)
	Oant_0344	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_2046 binding-protein-dependent transport systems inner membrane component. (286 aa)
	Oant_0345	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01825 putative permease ABC transporter protein. (297 aa)
	Oant_0346	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_4331 putative ABC-transport protein, ATP-binding component. (278 aa)
	Oant_0347	TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bms:BR0278 D-hydantoinase. (484 aa)
	Oant_0348	TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; KEGG: bmf:BAB1_0310 peptidase M20/M25/M40. (415 aa)
	Oant_0349	PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: bmb:BruAb1_0306 transcriptional regulator, TetR family. (232 aa)
	Oant_0350	PFAM: NUDIX hydrolase; KEGG: bms:BR0281 MutT/NUDIX family protein. (132 aa)
	Oant_0365	TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bmb:BruAb1_0308 dihydropyrimidine dehydrogenase. (436 aa)
	Oant_0366	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bme:BMEI1638 glutamate synthase (NADPH) small chain. (500 aa)
	Oant_1374	PFAM: Creatininase; KEGG: bms:BRA0986 creatinine amidohydrolase, putative. (260 aa)
	Oant_3867	PFAM: Endoribonuclease L-PSP; KEGG: mlo:mlr1297 hypothetical protein. (129 aa)
	Oant_3868	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bms:BRA0729 pyridine nucleotide-disulphide oxidoreductase family protein. (410 aa)
	Oant_3869	PFAM: Creatininase; KEGG: vei:Veis_3147 creatininase. (266 aa)
	Oant_3870	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_3146 ABC transporter related. (267 aa)
	Oant_3871	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3145 binding-protein-dependent transport systems inner membrane component. (280 aa)
	Oant_3872	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: vei:Veis_3139 amidohydrolase 3. (393 aa)
	Oant_3873	PFAM: FAD linked oxidase domain protein; KEGG: vei:Veis_3144 FAD linked oxidase domain protein. (459 aa)
	Oant_3874	PFAM: NMT1/THI5 like domain protein; KEGG: vei:Veis_3143 perplasmic binding protein of ABC transporter. (336 aa)
	Oant_3875	PFAM: regulatory protein TetR; KEGG: pfl:PFL_0730 transcriptional regulator, TetR family. (217 aa)

Your Current Organism:

Ochrobactrum anthropi

NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Oant_0343	Oant_0344	PFAM: NMT1/THI5 like domain protein; KEGG: sme:SMc01827 hypothetical protein.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_2046 binding-protein-dependent transport systems inner membrane component.	0.918
Oant_0343	Oant_0345	PFAM: NMT1/THI5 like domain protein; KEGG: sme:SMc01827 hypothetical protein.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01825 putative permease ABC transporter protein.	0.918
Oant_0343	Oant_0346	PFAM: NMT1/THI5 like domain protein; KEGG: sme:SMc01827 hypothetical protein.	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_4331 putative ABC-transport protein, ATP-binding component.	0.906
Oant_0343	Oant_0347	PFAM: NMT1/THI5 like domain protein; KEGG: sme:SMc01827 hypothetical protein.	TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bms:BR0278 D-hydantoinase.	0.819
Oant_0343	Oant_0348	PFAM: NMT1/THI5 like domain protein; KEGG: sme:SMc01827 hypothetical protein.	TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; KEGG: bmf:BAB1_0310 peptidase M20/M25/M40.	0.713
Oant_0343	Oant_0349	PFAM: NMT1/THI5 like domain protein; KEGG: sme:SMc01827 hypothetical protein.	PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: bmb:BruAb1_0306 transcriptional regulator, TetR family.	0.531
Oant_0343	Oant_0365	PFAM: NMT1/THI5 like domain protein; KEGG: sme:SMc01827 hypothetical protein.	TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bmb:BruAb1_0308 dihydropyrimidine dehydrogenase.	0.738
Oant_0343	Oant_0366	PFAM: NMT1/THI5 like domain protein; KEGG: sme:SMc01827 hypothetical protein.	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bme:BMEI1638 glutamate synthase (NADPH) small chain.	0.660
Oant_0343	Oant_3870	PFAM: NMT1/THI5 like domain protein; KEGG: sme:SMc01827 hypothetical protein.	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_3146 ABC transporter related.	0.441
Oant_0343	Oant_3871	PFAM: NMT1/THI5 like domain protein; KEGG: sme:SMc01827 hypothetical protein.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3145 binding-protein-dependent transport systems inner membrane component.	0.545
Oant_0344	Oant_0343	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_2046 binding-protein-dependent transport systems inner membrane component.	PFAM: NMT1/THI5 like domain protein; KEGG: sme:SMc01827 hypothetical protein.	0.918
Oant_0344	Oant_0345	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_2046 binding-protein-dependent transport systems inner membrane component.	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01825 putative permease ABC transporter protein.	0.843
Oant_0344	Oant_0346	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_2046 binding-protein-dependent transport systems inner membrane component.	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_4331 putative ABC-transport protein, ATP-binding component.	0.946
Oant_0344	Oant_0347	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_2046 binding-protein-dependent transport systems inner membrane component.	TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bms:BR0278 D-hydantoinase.	0.830
Oant_0344	Oant_0348	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_2046 binding-protein-dependent transport systems inner membrane component.	TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; KEGG: bmf:BAB1_0310 peptidase M20/M25/M40.	0.662
Oant_0344	Oant_0349	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_2046 binding-protein-dependent transport systems inner membrane component.	PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: bmb:BruAb1_0306 transcriptional regulator, TetR family.	0.539
Oant_0344	Oant_0365	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_2046 binding-protein-dependent transport systems inner membrane component.	TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bmb:BruAb1_0308 dihydropyrimidine dehydrogenase.	0.610
Oant_0344	Oant_0366	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_2046 binding-protein-dependent transport systems inner membrane component.	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bme:BMEI1638 glutamate synthase (NADPH) small chain.	0.481
Oant_0344	Oant_3870	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_2046 binding-protein-dependent transport systems inner membrane component.	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_3146 ABC transporter related.	0.652
Oant_0344	Oant_3874	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_2046 binding-protein-dependent transport systems inner membrane component.	PFAM: NMT1/THI5 like domain protein; KEGG: vei:Veis_3143 perplasmic binding protein of ABC transporter.	0.592

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