STRINGSTRING
potA-4 potA-4 Oant_2790 Oant_2790 Oant_2804 Oant_2804 Oant_3577 Oant_3577 Oant_3579 Oant_3579 Oant_3704 Oant_3704 Oant_3715 Oant_3715 potA potA Oant_3926 Oant_3926 potA-2 potA-2 Oant_4154 Oant_4154 Oant_4438 Oant_4438
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
potA-4Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (353 aa)
Oant_2790PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4192 putative transmembrane component of ABC transporter. (326 aa)
Oant_2804PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_4253 binding-protein-dependent transport systems inner membrane component. (299 aa)
Oant_3577PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMa0391 putative ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (378 aa)
Oant_3579PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0394 putative ABC transporter, permease. (314 aa)
Oant_3704PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4248 ABC transporter permease protein. (274 aa)
Oant_3715PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0328 spermidine/putrescine ABC transporter, permease protein, putative. (391 aa)
potASpermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (355 aa)
Oant_3926PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bme:BMEI0413 putrescine transport system permease protein PotH. (303 aa)
potA-2Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (381 aa)
Oant_4154PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3395 ABC opine/polyamine transporter, inner membrane subunit. (296 aa)
Oant_4438PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3946 binding-protein-dependent transport systems inner membrane component. (296 aa)
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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