STRINGSTRING
Oant_0203 Oant_0203 Oant_0699 Oant_0699 Oant_0882 Oant_0882 xerD xerD xerC xerC Oant_1148 Oant_1148 Oant_1149 Oant_1149 Oant_1150 Oant_1150 Oant_1310 Oant_1310 Oant_1790 Oant_1790 Oant_1844 Oant_1844 Oant_2161 Oant_2161 Oant_2329 Oant_2329 Oant_2647 Oant_2647 Oant_4340 Oant_4340 Oant_4334 Oant_4334 Oant_4322 Oant_4322 Oant_4313 Oant_4313 Oant_3683 Oant_3683 Oant_3164 Oant_3164 Oant_3162 Oant_3162
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Oant_0203PFAM: phage integrase family protein; KEGG: nha:Nham_3311 phage integrase. (353 aa)
Oant_0699PFAM: phage integrase family protein; KEGG: rpe:RPE_1075 phage integrase family protein. (720 aa)
Oant_0882PFAM: phage integrase family protein; KEGG: mta:Moth_1796 phage integrase; Belongs to the 'phage' integrase family. (414 aa)
xerDTyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (307 aa)
xerCTyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (315 aa)
Oant_1148Hypothetical protein. (478 aa)
Oant_1149Hypothetical protein. (656 aa)
Oant_1150PFAM: phage integrase family protein. (742 aa)
Oant_1310KEGG: rde:RD1_2485 hypothetical protein. (438 aa)
Oant_1790PFAM: phage integrase family protein; KEGG: mag:amb2709 integrase; Belongs to the 'phage' integrase family. (361 aa)
Oant_1844PFAM: phage integrase family protein; KEGG: rsp:RSP_0217 possible phage-related integrase; Belongs to the 'phage' integrase family. (426 aa)
Oant_2161PFAM: phage integrase family protein; KEGG: pde:Pden_3849 phage integrase family protein. (297 aa)
Oant_2329PFAM: phage integrase family protein; KEGG: jan:Jann_3521 phage integrase. (454 aa)
Oant_2647PFAM: phage integrase family protein; KEGG: bmb:BruAb1_0654 site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family. (315 aa)
Oant_4340PFAM: phage integrase family protein; KEGG: mes:Meso_3806 phage integrase; Belongs to the 'phage' integrase family. (420 aa)
Oant_4334KEGG: eli:ELI_04185 phage integrase family protein. (173 aa)
Oant_4322PFAM: phage integrase family protein; KEGG: mag:amb1630 hypothetical protein. (193 aa)
Oant_4313KEGG: mes:Meso_2773 hypothetical protein. (370 aa)
Oant_3683PFAM: phage integrase family protein; KEGG: ppd:Ppro_1859 phage integrase family protein; Belongs to the 'phage' integrase family. (444 aa)
Oant_3164PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: mes:Meso_4144 phage integrase-like SAM-like; Belongs to the 'phage' integrase family. (479 aa)
Oant_3162KEGG: mes:Meso_4142 hypothetical protein. (714 aa)
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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