(29 nodes) Papain-like cysteine peptidase superfamily network (Cryptosporidium muris)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CMU_003360	Cathepsin C, putative; Belongs to the peptidase C1 family. (760 aa)
	CMU_035900	Ubiquitin carboxyl-terminal hydrolase. (369 aa)
	CMU_003500	Ubiquitin carboxyl-terminal hydrolase family protein. (227 aa)
	CMU_022340	Ubiquitin thiolesterase, putative. (122 aa)
	CMU_039000	Ulp1 protease family, C-terminal catalytic domain-containing protein. (432 aa)
	CMU_042440	Ulp1 protease family, C-terminal catalytic domain-containing protein. (316 aa)
	CMU_041690	Ubiquitin carboxyl-terminal hydrolase domain-containing protein; Belongs to the peptidase C19 family. (757 aa)
	CMU_041120	C2 domain-containing protein. (1566 aa)
	CMU_039440	Ubiquitin carboxyl-terminal hydrolase family protein. (469 aa)
	CMU_039290	Ubiquitin carboxyl-terminal hydrolase family protein. (1667 aa)
	CMU_025250	Calpain family cysteine protease domain-containing protein; Belongs to the peptidase C2 family. (897 aa)
	CMU_038030	Papain family cysteine protease, putative; Belongs to the peptidase C1 family. (364 aa)
	CMU_020980	Ubiquitin carboxyl-terminal hydrolase. (827 aa)
	CMU_021330	Papain family cysteine protease, putative; Belongs to the peptidase C1 family. (400 aa)
	CMU_014090	OTU-like cysteine protease family protein. (244 aa)
	CMU_010270	OTU-like cysteine protease family protein. (300 aa)
	CMU_008410	DNA repair protein rad4, putative. (763 aa)
	CMU_007080	OTU-like cysteine protease family protein. (661 aa)
	CMU_016300	Papain family cysteine protease, putative; Belongs to the peptidase C1 family. (606 aa)
	CMU_024120	Ubiquitin carboxyl-terminal hydrolase family protein; Belongs to the peptidase C19 family. (1157 aa)
	CMU_023740	Ubiquitin carboxyl-terminal hydrolase. (271 aa)
	CMU_022830	Papain family cysteine protease, putative; Belongs to the peptidase C1 family. (661 aa)
	CMU_025460	Ubiquitin carboxyl-terminal hydrolase family protein; Belongs to the peptidase C19 family. (1474 aa)
	CMU_037350	Uncharacterized protein. (131 aa)
	CMU_037360	OTU domain-containing protein. (110 aa)
	CMU_011370	Exonuclease family protein. (1728 aa)
	CMU_000480	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (353 aa)
	CMU_034960	Ubiquitin carboxyl-terminal hydrolase family protein; Belongs to the peptidase C19 family. (479 aa)
	CMU_015090	Ubiquitin carboxyl-terminal hydrolase family protein; Belongs to the peptidase C19 family. (876 aa)

Your Current Organism:

Cryptosporidium muris

NCBI taxonomy Id: 441375
Other names: C. muris RN66, Cryptosporidium muris RN66

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMU_003500	CMU_010270	B6AJX9	B6AE94	Ubiquitin carboxyl-terminal hydrolase family protein.	OTU-like cysteine protease family protein.	0.702
CMU_003500	CMU_020980	B6AJX9	B6AJE4	Ubiquitin carboxyl-terminal hydrolase family protein.	Ubiquitin carboxyl-terminal hydrolase.	0.612
CMU_003500	CMU_022340	B6AJX9	B6AK79	Ubiquitin carboxyl-terminal hydrolase family protein.	Ubiquitin thiolesterase, putative.	0.421
CMU_003500	CMU_023740	B6AJX9	B6AC16	Ubiquitin carboxyl-terminal hydrolase family protein.	Ubiquitin carboxyl-terminal hydrolase.	0.646
CMU_003500	CMU_024120	B6AJX9	B6AC54	Ubiquitin carboxyl-terminal hydrolase family protein.	Ubiquitin carboxyl-terminal hydrolase family protein; Belongs to the peptidase C19 family.	0.717
CMU_003500	CMU_025460	B6AJX9	B6AAY8	Ubiquitin carboxyl-terminal hydrolase family protein.	Ubiquitin carboxyl-terminal hydrolase family protein; Belongs to the peptidase C19 family.	0.600
CMU_003500	CMU_034960	B6AJX9	B6AFW9	Ubiquitin carboxyl-terminal hydrolase family protein.	Ubiquitin carboxyl-terminal hydrolase family protein; Belongs to the peptidase C19 family.	0.682
CMU_003500	CMU_035900	B6AJX9	B6AGS6	Ubiquitin carboxyl-terminal hydrolase family protein.	Ubiquitin carboxyl-terminal hydrolase.	0.538
CMU_003500	CMU_037350	B6AJX9	B6AH70	Ubiquitin carboxyl-terminal hydrolase family protein.	Uncharacterized protein.	0.635
CMU_003500	CMU_037360	B6AJX9	B6AH71	Ubiquitin carboxyl-terminal hydrolase family protein.	OTU domain-containing protein.	0.635
CMU_003500	CMU_039290	B6AJX9	B6A9H1	Ubiquitin carboxyl-terminal hydrolase family protein.	Ubiquitin carboxyl-terminal hydrolase family protein.	0.600
CMU_008410	CMU_022340	B6ADQ9	B6AK79	DNA repair protein rad4, putative.	Ubiquitin thiolesterase, putative.	0.459
CMU_010270	CMU_003500	B6AE94	B6AJX9	OTU-like cysteine protease family protein.	Ubiquitin carboxyl-terminal hydrolase family protein.	0.702
CMU_010270	CMU_020980	B6AE94	B6AJE4	OTU-like cysteine protease family protein.	Ubiquitin carboxyl-terminal hydrolase.	0.692
CMU_010270	CMU_022340	B6AE94	B6AK79	OTU-like cysteine protease family protein.	Ubiquitin thiolesterase, putative.	0.577
CMU_010270	CMU_023740	B6AE94	B6AC16	OTU-like cysteine protease family protein.	Ubiquitin carboxyl-terminal hydrolase.	0.571
CMU_010270	CMU_024120	B6AE94	B6AC54	OTU-like cysteine protease family protein.	Ubiquitin carboxyl-terminal hydrolase family protein; Belongs to the peptidase C19 family.	0.611
CMU_010270	CMU_025460	B6AE94	B6AAY8	OTU-like cysteine protease family protein.	Ubiquitin carboxyl-terminal hydrolase family protein; Belongs to the peptidase C19 family.	0.439
CMU_010270	CMU_034960	B6AE94	B6AFW9	OTU-like cysteine protease family protein.	Ubiquitin carboxyl-terminal hydrolase family protein; Belongs to the peptidase C19 family.	0.553
CMU_010270	CMU_037350	B6AE94	B6AH70	OTU-like cysteine protease family protein.	Uncharacterized protein.	0.404