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Mpop_0366 Mpop_0366 Mpop_0374 Mpop_0374 Mpop_1003 Mpop_1003 Mpop_2345 Mpop_2345 Mpop_5337 Mpop_5337
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mpop_0366KEGG: mex:Mext_0290 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein. (688 aa)
Mpop_0374TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; KEGG: mex:Mext_0298 LAO/AO transport system ATPase. (329 aa)
Mpop_1003KEGG: mex:Mext_1069 methylmalonyl-CoA epimerase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase. (134 aa)
Mpop_2345PFAM: methylmalonyl-CoA mutase; KEGG: mex:Mext_2388 methylmalonyl-CoA mutase. (605 aa)
Mpop_5337KEGG: mex:Mext_4794 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein. (721 aa)
Your Current Organism:
Methylorubrum populi
NCBI taxonomy Id: 441620
Other names: M. populi BJ001, Methylobacterium populi BJ001, Methylobacterium sp. BJ001, Methylorubrum populi BJ001
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