STRINGSTRING
Mpop_4016 Mpop_4016 Mpop_4017 Mpop_4017
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mpop_4016PFAM: IucA/IucC family protein; KEGG: mex:Mext_3760 IucA/IucC family protein. (595 aa)
Mpop_4017IucA/IucC family protein; PFAM: AMP-dependent synthetase and ligase; IucA/IucC family protein; KEGG: mex:Mext_3761 IucA/IucC family protein. (991 aa)
Your Current Organism:
Methylorubrum populi
NCBI taxonomy Id: 441620
Other names: M. populi BJ001, Methylobacterium populi BJ001, Methylobacterium sp. BJ001, Methylorubrum populi BJ001
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