STRINGSTRING
PMAA_017020 PMAA_017020 PMAA_037420 PMAA_037420 PMAA_018430 PMAA_018430 PMAA_038570 PMAA_038570 PMAA_019800 PMAA_019800 PMAA_030100 PMAA_030100 PMAA_034980 PMAA_034980 PMAA_016040 PMAA_016040 PMAA_016090 PMAA_016090 PMAA_016100 PMAA_016100 PMAA_036470 PMAA_036470 PMAA_071830 PMAA_071830 PMAA_073000 PMAA_073000 PMAA_086930 PMAA_086930 PMAA_083430 PMAA_083430 PMAA_086000 PMAA_086000 PMAA_040320 PMAA_040320 PMAA_042060 PMAA_042060 PMAA_004220 PMAA_004220 PMAA_003250 PMAA_003250 PMAA_011940 PMAA_011940
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PMAA_017020Ubiquitin conjugating enzyme (UbcJ), putative; Belongs to the ubiquitin-conjugating enzyme family. (169 aa)
PMAA_037420Ubiquitin conjugating enzyme (UbcA), putative; Belongs to the ubiquitin-conjugating enzyme family. (246 aa)
PMAA_018430Ubiquitin conjugating enzyme (UbcM), putative; Belongs to the ubiquitin-conjugating enzyme family. (150 aa)
PMAA_038570Ubiquitin conjugating enzyme (UbcF), putative. (321 aa)
PMAA_019800Ubiquitin conjugating enzyme, putative. (1175 aa)
PMAA_030100Ubiquitin conjugating enzyme Ubc8, putative; Belongs to the ubiquitin-conjugating enzyme family. (186 aa)
PMAA_034980Ubiquitin conjugating enzyme, putative. (157 aa)
PMAA_016040Ubiquitin conjugating enzyme (UbcB), putative; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
PMAA_016090Ubiquitin conjugating enzyme, putative; Belongs to the ubiquitin-conjugating enzyme family. (169 aa)
PMAA_016100Uncharacterized protein. (361 aa)
PMAA_036470Poly(A)+ RNA transport protein (UbaA), putative; Belongs to the ubiquitin-activating E1 family. (1039 aa)
PMAA_071830Ubiquitin-protein ligase Ufd4, putative. (1828 aa)
PMAA_073000E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (2142 aa)
PMAA_086930C2H2 zinc finger protein. (822 aa)
PMAA_083430Ubiquitin conjugating enzyme (UbcH), putative; Belongs to the ubiquitin-conjugating enzyme family. (166 aa)
PMAA_086000Ubiquitin-conjugating enzyme Ubc6, putative. (279 aa)
PMAA_040320Polyubiquitin UbiD/Ubi4, putative. (305 aa)
PMAA_042060Ubiquitin conjugating enzyme (MmsB), putative. (138 aa)
PMAA_004220Ubiquitin conjugating enzyme (UbcD), putative; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
PMAA_003250Ubiquitin thiolesterase (OtuB1), putative. (481 aa)
PMAA_011940E3 ubiquitin protein ligase. (728 aa)
Your Current Organism:
Talaromyces marneffei
NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224
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