15 items (Talaromyces marneffei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PMAA_028710	37S ribosomal protein S18, putative. (211 aa)
	PMAA_019680	Ribosomal protein S15, putative. (306 aa)
	PMAA_032400	37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (418 aa)
	PMAA_026120	40S ribosomal protein S2, putative. (358 aa)
	PMAA_073360	37S ribosomal protein S12. (208 aa)
	PMAA_078210	50S ribosomal protein Mrp49. (207 aa)
	PMAA_079620	37S ribosomal protein S16. (107 aa)
	PMAA_080630	37S ribosomal protein Rsm24, putative. (401 aa)
	PMAA_082210	Nucleoside diphosphate kinase. (153 aa)
	PMAA_085260	Mitochondrial ribosomal protein DAP3, putative. (522 aa)
	PMAA_097720	37S ribosomal protein Mrp17. (149 aa)
	PMAA_054630	30S ribosomal protein S7, putative. (364 aa)
	PMAA_045250	40S ribosomal protein S14, putative. (113 aa)
	PMAA_044440	37S ribosomal protein S11, putative. (241 aa)
	PMAA_011310	37 ribosomal protein Rsm10, putative. (277 aa)

Your Current Organism:

Talaromyces marneffei

NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PMAA_011310	PMAA_019680	B6QV79	B6Q3G1	37 ribosomal protein Rsm10, putative.	Ribosomal protein S15, putative.	0.999
PMAA_011310	PMAA_026120	B6QV79	B6Q7L1	37 ribosomal protein Rsm10, putative.	40S ribosomal protein S2, putative.	0.999
PMAA_011310	PMAA_028710	B6QV79	B6Q387	37 ribosomal protein Rsm10, putative.	37S ribosomal protein S18, putative.	0.996
PMAA_011310	PMAA_032400	B6QV79	B6Q5H5	37 ribosomal protein Rsm10, putative.	37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
PMAA_011310	PMAA_044440	B6QV79	B6QS37	37 ribosomal protein Rsm10, putative.	37S ribosomal protein S11, putative.	0.999
PMAA_011310	PMAA_045250	B6QV79	B6QQS8	37 ribosomal protein Rsm10, putative.	40S ribosomal protein S14, putative.	0.999
PMAA_011310	PMAA_054630	B6QV79	B6QKP0	37 ribosomal protein Rsm10, putative.	30S ribosomal protein S7, putative.	0.989
PMAA_011310	PMAA_073360	B6QV79	B6QAG4	37 ribosomal protein Rsm10, putative.	37S ribosomal protein S12.	0.999
PMAA_011310	PMAA_078210	B6QV79	B6QDK6	37 ribosomal protein Rsm10, putative.	50S ribosomal protein Mrp49.	0.998
PMAA_011310	PMAA_079620	B6QV79	B6QED4	37 ribosomal protein Rsm10, putative.	37S ribosomal protein S16.	0.999
PMAA_011310	PMAA_080630	B6QV79	B6QF10	37 ribosomal protein Rsm10, putative.	37S ribosomal protein Rsm24, putative.	0.999
PMAA_011310	PMAA_082210	B6QV79	B6QFI0	37 ribosomal protein Rsm10, putative.	Nucleoside diphosphate kinase.	0.995
PMAA_011310	PMAA_085260	B6QV79	B6QGE4	37 ribosomal protein Rsm10, putative.	Mitochondrial ribosomal protein DAP3, putative.	0.999
PMAA_011310	PMAA_097720	B6QV79	B6QII8	37 ribosomal protein Rsm10, putative.	37S ribosomal protein Mrp17.	0.999
PMAA_019680	PMAA_011310	B6Q3G1	B6QV79	Ribosomal protein S15, putative.	37 ribosomal protein Rsm10, putative.	0.999
PMAA_019680	PMAA_026120	B6Q3G1	B6Q7L1	Ribosomal protein S15, putative.	40S ribosomal protein S2, putative.	0.999
PMAA_019680	PMAA_028710	B6Q3G1	B6Q387	Ribosomal protein S15, putative.	37S ribosomal protein S18, putative.	0.998
PMAA_019680	PMAA_032400	B6Q3G1	B6Q5H5	Ribosomal protein S15, putative.	37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
PMAA_019680	PMAA_044440	B6Q3G1	B6QS37	Ribosomal protein S15, putative.	37S ribosomal protein S11, putative.	0.999
PMAA_019680	PMAA_045250	B6Q3G1	B6QQS8	Ribosomal protein S15, putative.	40S ribosomal protein S14, putative.	0.999