25 items (Talaromyces marneffei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PMAA_011600	Dhp1-interacting protein Din1, putative. (355 aa)
	PMAA_036870	HIT finger domain protein, putative. (391 aa)
	PMAA_071580	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (430 aa)
	PMAA_073450	Ribosome biogenesis protein Urb1, putative. (1128 aa)
	PMAA_017890	Protein MAK16; Belongs to the MAK16 family. (327 aa)
	PMAA_027560	Ribosomal biogenesis protein Gar2. (453 aa)
	PMAA_027650	Ribosome biogenesis (Nop4), putative. (728 aa)
	PMAA_037920	rRNA biogenesis protein RRP5, putative. (1807 aa)
	PMAA_028450	ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family. (503 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (794 aa)
	PMAA_033210	ATP dependent RNA helicase (Dbp7), putative; Belongs to the DEAD box helicase family. (805 aa)
	PMAA_033560	Cell morphogenesis protein Las1, putative. (439 aa)
	PMAA_033570	Uncharacterized protein. (330 aa)
	PMAA_068700	F-box domain protein. (374 aa)
	PMAA_068710	60S ribosome biogenesis protein Brx1, putative. (363 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (768 aa)
	PMAA_016960	ATP dependent RNA helicase (Dbp9), putative. (621 aa)
	PMAA_086750	RNA processing factor 1. (412 aa)
	PMAA_088610	60S ribosomal protein L7. (249 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (675 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (485 aa)
	PMAA_054420	HIT finger domain protein, putative. (178 aa)
	PMAA_059200	Ribosome biogenesis protein, putative. (358 aa)
	PMAA_043820	GTP binding protein, putative. (549 aa)
	PMAA_043860	60S ribosomal protein L35. (125 aa)

Your Current Organism:

Talaromyces marneffei

NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	NOP7	B6Q718	B6QEM7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	PMAA_016960	B6Q718	B6Q1B4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	ATP dependent RNA helicase (Dbp9), putative.	0.939
ERB1	PMAA_017890	B6Q718	B6Q1Z2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Protein MAK16; Belongs to the MAK16 family.	0.955
ERB1	PMAA_027560	B6Q718	B6Q236	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosomal biogenesis protein Gar2.	0.986
ERB1	PMAA_027650	B6Q718	B6Q246	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis (Nop4), putative.	0.892
ERB1	PMAA_028450	B6Q718	B6Q358	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family.	0.882
ERB1	PMAA_033210	B6Q718	B6Q5X5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	ATP dependent RNA helicase (Dbp7), putative; Belongs to the DEAD box helicase family.	0.872
ERB1	PMAA_033560	B6Q718	B6Q675	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Cell morphogenesis protein Las1, putative.	0.715
ERB1	PMAA_033570	B6Q718	B6Q676	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.713
ERB1	PMAA_037920	B6Q718	B6Q2D8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	rRNA biogenesis protein RRP5, putative.	0.903
ERB1	PMAA_043820	B6Q718	B6QS56	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	GTP binding protein, putative.	0.999
ERB1	PMAA_043860	B6Q718	B6QS60	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein L35.	0.883
ERB1	PMAA_059200	B6Q718	B6QM13	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein, putative.	0.986
ERB1	PMAA_068700	B6Q718	B6Q8H2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	F-box domain protein.	0.949
ERB1	PMAA_068710	B6Q718	B6Q8H3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosome biogenesis protein Brx1, putative.	0.966
ERB1	PMAA_071580	B6Q718	B6Q9C8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.685
ERB1	PMAA_073450	B6Q718	B6QAH3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein Urb1, putative.	0.636
ERB1	PMAA_086750	B6Q718	B6QCZ6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RNA processing factor 1.	0.968
ERB1	PMAA_088610	B6Q718	B6QE45	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein L7.	0.995
ERB1	SPB1	B6Q718	B6Q4U1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.993