46 items (Talaromyces marneffei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PMAA_011370	Uncharacterized protein. (484 aa)
	PMAA_011330	Nucleolus protein required for cell viability, putative. (227 aa)
	PMAA_011600	Dhp1-interacting protein Din1, putative. (355 aa)
	PMAA_009210	Ribosome biogenesis protein Noc4, putative. (560 aa)
	PMAA_005660	rRNA processing protein Bystin, putative. (507 aa)
	PMAA_068700	F-box domain protein. (374 aa)
	PMAA_025780	Exosome complex exonuclease Rrp6, putative. (795 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (768 aa)
	PMAA_024890	Ribosome biogenesis protein Kri1. (621 aa)
	PMAA_033870	Exosome complex subunit Csl4, putative. (247 aa)
	PMAA_068710	60S ribosome biogenesis protein Brx1, putative. (363 aa)
	PMAA_071170	Exosome complex endonuclease 2/ribosomal RNA processing protein, putative. (294 aa)
	PMAA_073450	Ribosome biogenesis protein Urb1, putative. (1128 aa)
	PMAA_076140	3' exoribonuclease family protein (Rrp42), putative. (401 aa)
	PMAA_086750	RNA processing factor 1. (412 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (675 aa)
	PMAA_081980	Small nucleolar ribonucleoprotein complex subunit (Pwp2), putative. (882 aa)
	PMAA_085270	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (216 aa)
	PMAA_092820	Small nucleolar ribonucleoprotein complex subunit, putative. (540 aa)
	PMAA_046430	Methyltransferase, putative. (281 aa)
	PMAA_094000	Small nucleolar ribonucleoprotein complex subunit, putative. (631 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (485 aa)
	PMAA_101490	Exonuclease, putative. (721 aa)
	PMAA_053990	Pre-rRNA processing protein Mrd1, putative. (812 aa)
	PMAA_054660	Small nucleolar ribonucleoprotein complex subunit Utp14, putatrive. (969 aa)
	PMAA_059410	RNA-3'-phosphate cyclase family protein. (404 aa)
	PMAA_051800	Small nucleolar ribonucleoprotein complex subunit Dip2, putative. (957 aa)
	PMAA_047150	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (86 aa)
	PMAA_033570	Uncharacterized protein. (330 aa)
	PMAA_033560	Cell morphogenesis protein Las1, putative. (439 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (794 aa)
	PMAA_021850	Exosome complex subunit Rrp46, putative. (249 aa)
	PMAA_019760	Nucleolar protein nop5. (593 aa)
	PMAA_028450	ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family. (503 aa)
	PMAA_018700	3' exoribonuclease family protein. (408 aa)
	PMAA_047240	Exosome complex endonuclease 1/ribosomal RNA processing protein, putative. (283 aa)
	PMAA_048600	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (349 aa)
	PMAA_042170	Ribonuclease P protein subunit p40, putative. (372 aa)
	PMAA_042220	Exosome complex exonuclease exoribonuclease (Rrp44), putative; Belongs to the RNR ribonuclease family. (1025 aa)
	PMAA_045180	Exosome complex exonuclease Rrp40, putative. (279 aa)
	PMAA_046470	rRNA processing protein (Rrp20), putative. (257 aa)
	PMAA_005490	DUF652 domain protein. (190 aa)
	PMAA_004820	Exosome complex exonuclease Rrp4, putative. (380 aa)
	PMAA_037920	rRNA biogenesis protein RRP5, putative. (1807 aa)
	PMAA_017890	Protein MAK16; Belongs to the MAK16 family. (327 aa)
	PMAA_003750	Exosome-associated family protein. (288 aa)

Your Current Organism:

Talaromyces marneffei

NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	NOP7	B6Q718	B6QEM7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	PMAA_005660	B6Q718	B6QTQ3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	rRNA processing protein Bystin, putative.	0.867
ERB1	PMAA_009210	B6Q718	B6QUH8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein Noc4, putative.	0.724
ERB1	PMAA_017890	B6Q718	B6Q1Z2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Protein MAK16; Belongs to the MAK16 family.	0.955
ERB1	PMAA_019760	B6Q718	B6Q3H1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nucleolar protein nop5.	0.962
ERB1	PMAA_024890	B6Q718	B6Q6K1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein Kri1.	0.530
ERB1	PMAA_028450	B6Q718	B6Q358	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family.	0.882
ERB1	PMAA_033560	B6Q718	B6Q675	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Cell morphogenesis protein Las1, putative.	0.715
ERB1	PMAA_033570	B6Q718	B6Q676	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.713
ERB1	PMAA_037920	B6Q718	B6Q2D8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	rRNA biogenesis protein RRP5, putative.	0.903
ERB1	PMAA_046470	B6Q718	B6QRG7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	rRNA processing protein (Rrp20), putative.	0.447
ERB1	PMAA_048600	B6Q718	B6QPI4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.501
ERB1	PMAA_051800	B6Q718	B6QN30	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Small nucleolar ribonucleoprotein complex subunit Dip2, putative.	0.920
ERB1	PMAA_053990	B6Q718	B6QKH1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pre-rRNA processing protein Mrd1, putative.	0.846
ERB1	PMAA_054660	B6Q718	B6QKP3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Small nucleolar ribonucleoprotein complex subunit Utp14, putatrive.	0.838
ERB1	PMAA_059410	B6Q718	B6QM35	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RNA-3'-phosphate cyclase family protein.	0.566
ERB1	PMAA_068700	B6Q718	B6Q8H2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	F-box domain protein.	0.949
ERB1	PMAA_068710	B6Q718	B6Q8H3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosome biogenesis protein Brx1, putative.	0.966
ERB1	PMAA_073450	B6Q718	B6QAH3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein Urb1, putative.	0.636
ERB1	PMAA_081980	B6Q718	B6QFF5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Small nucleolar ribonucleoprotein complex subunit (Pwp2), putative.	0.855