16 items (Talaromyces marneffei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PMAA_080510	Homogentisate 1,2-dioxygenase, putative. (344 aa)
	PMAA_031950	4-hydroxyphenylpyruvate dioxygenase. (415 aa)
	PMAA_031960	Homogentisate 1,2-dioxygenase (HmgA), putative. (454 aa)
	PMAA_099050	Fumarylacetoacetase. (431 aa)
	PMAA_102000	Homogentisate 1,2-dioxygenase, putative. (482 aa)
	PMAA_054730	Homogentisate 1,2-dioxygenase, putative. (621 aa)
	PMAA_040900	Uncharacterized protein. (84 aa)
	PMAA_003960	Uncharacterized protein. (74 aa)
	PMAA_031990	Fumarylacetoacetase. (436 aa)
	PMAA_032000	Maleylacetoacetate isomerase MaiA; Belongs to the GST superfamily. (229 aa)
	PMAA_033480	Phenylalanine ammonia-lyase. (705 aa)
	PMAA_035450	Homogentisate 1,2-dioxygenase, putative. (491 aa)
	PMAA_075540	Phenylalanine ammonia-lyase. (685 aa)
	PMAA_075700	Uncharacterized protein. (340 aa)
	PMAA_089170	4-hydroxyphenylpyruvate dioxygenase. (407 aa)
	PMAA_080500	Fumarylacetoacetase. (372 aa)

Your Current Organism:

Talaromyces marneffei

NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PMAA_003960	PMAA_031950	B6QT33	B6Q562	Uncharacterized protein.	4-hydroxyphenylpyruvate dioxygenase.	0.407
PMAA_003960	PMAA_031960	B6QT33	B6Q563	Uncharacterized protein.	Homogentisate 1,2-dioxygenase (HmgA), putative.	0.743
PMAA_003960	PMAA_031990	B6QT33	B6Q566	Uncharacterized protein.	Fumarylacetoacetase.	0.730
PMAA_003960	PMAA_035450	B6QT33	B6Q786	Uncharacterized protein.	Homogentisate 1,2-dioxygenase, putative.	0.656
PMAA_003960	PMAA_040900	B6QT33	B6QQ88	Uncharacterized protein.	Uncharacterized protein.	0.414
PMAA_003960	PMAA_054730	B6QT33	B6QKP9	Uncharacterized protein.	Homogentisate 1,2-dioxygenase, putative.	0.609
PMAA_003960	PMAA_080500	B6QT33	B6QEU5	Uncharacterized protein.	Fumarylacetoacetase.	0.730
PMAA_003960	PMAA_080510	B6QT33	B6QEU6	Uncharacterized protein.	Homogentisate 1,2-dioxygenase, putative.	0.426
PMAA_003960	PMAA_099050	B6QT33	B6QIX0	Uncharacterized protein.	Fumarylacetoacetase.	0.675
PMAA_003960	PMAA_102000	B6QT33	B6QKC3	Uncharacterized protein.	Homogentisate 1,2-dioxygenase, putative.	0.656
PMAA_031950	PMAA_003960	B6Q562	B6QT33	4-hydroxyphenylpyruvate dioxygenase.	Uncharacterized protein.	0.407
PMAA_031950	PMAA_031960	B6Q562	B6Q563	4-hydroxyphenylpyruvate dioxygenase.	Homogentisate 1,2-dioxygenase (HmgA), putative.	0.987
PMAA_031950	PMAA_031990	B6Q562	B6Q566	4-hydroxyphenylpyruvate dioxygenase.	Fumarylacetoacetase.	0.706
PMAA_031950	PMAA_032000	B6Q562	B6Q567	4-hydroxyphenylpyruvate dioxygenase.	Maleylacetoacetate isomerase MaiA; Belongs to the GST superfamily.	0.407
PMAA_031950	PMAA_035450	B6Q562	B6Q786	4-hydroxyphenylpyruvate dioxygenase.	Homogentisate 1,2-dioxygenase, putative.	0.978
PMAA_031950	PMAA_054730	B6Q562	B6QKP9	4-hydroxyphenylpyruvate dioxygenase.	Homogentisate 1,2-dioxygenase, putative.	0.978
PMAA_031950	PMAA_080500	B6Q562	B6QEU5	4-hydroxyphenylpyruvate dioxygenase.	Fumarylacetoacetase.	0.702
PMAA_031950	PMAA_080510	B6Q562	B6QEU6	4-hydroxyphenylpyruvate dioxygenase.	Homogentisate 1,2-dioxygenase, putative.	0.703
PMAA_031950	PMAA_089170	B6Q562	B6QEH2	4-hydroxyphenylpyruvate dioxygenase.	4-hydroxyphenylpyruvate dioxygenase.	0.902
PMAA_031950	PMAA_099050	B6Q562	B6QIX0	4-hydroxyphenylpyruvate dioxygenase.	Fumarylacetoacetase.	0.595