STRINGSTRING
PMAA_011940 PMAA_011940 PMAA_079100 PMAA_079100 PMAA_078770 PMAA_078770 PMAA_074580 PMAA_074580 PMAA_016040 PMAA_016040 PMAA_053550 PMAA_053550
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PMAA_011940E3 ubiquitin protein ligase. (728 aa)
PMAA_079100RBR-type E3 ubiquitin transferase. (531 aa)
PMAA_078770RING-type domain-containing protein. (278 aa)
PMAA_074580Uncharacterized protein. (508 aa)
PMAA_016040Ubiquitin conjugating enzyme (UbcB), putative; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
PMAA_053550PHD finger and BAH domain protein (Snt2), putative. (1749 aa)
Your Current Organism:
Talaromyces marneffei
NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224
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