50 items (Talaromyces marneffei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PMAA_051030	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (65 aa)
	PMAA_050440	60S ribosomal protein L10 family protein. (134 aa)
	PMAA_060070	60S acidic ribosomal protein P2/allergen Asp F 8; Belongs to the eukaryotic ribosomal protein P1/P2 family. (111 aa)
	PMAA_058510	Uncharacterized protein. (311 aa)
	PMAA_057350	60S ribosomal protein L37a. (91 aa)
	PMAA_055690	Ribosomal protein L34 protein, putative. (120 aa)
	PMAA_055500	60S ribosomal protein L27a, putative; Belongs to the universal ribosomal protein uL15 family. (150 aa)
	PMAA_055360	Zn(2)-C6 fungal-type domain-containing protein. (889 aa)
	PMAA_054390	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (203 aa)
	PMAA_054240	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (174 aa)
	PMAA_090940	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (392 aa)
	PMAA_094430	60S ribosomal protein L38, putative; Belongs to the eukaryotic ribosomal protein eL38 family. (80 aa)
	PMAA_094290	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (175 aa)
	PMAA_093960	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (103 aa)
	PMAA_086460	60S ribosomal protein L23. (233 aa)
	PMAA_085750	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (226 aa)
	PMAA_084370	60S ribosomal protein L8, putative. (254 aa)
	PMAA_081790	60S ribosomal protein L4, putative. (372 aa)
	PMAA_089730	60S ribosomal protein L27a, putative; Belongs to the universal ribosomal protein uL15 family. (150 aa)
	PMAA_088610	60S ribosomal protein L7. (249 aa)
	PMAA_078130	Cytosolic large ribosomal subunit protein L7A. (260 aa)
	PMAA_077800	60S ribosomal protein L31e. (123 aa)
	PMAA_068040	60S ribosomal protein L5, putative. (300 aa)
	PMAA_067210	60S ribosomal protein L30, putative. (106 aa)
	PMAA_065530	60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (187 aa)
	PMAA_069720	60S ribosomal protein L18. (184 aa)
	PMAA_026430	60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (110 aa)
	PMAA_024190	Ribosomal protein L16a; Belongs to the universal ribosomal protein uL13 family. (202 aa)
	PMAA_003100	Ribosomal protein L37; Binds to the 23S rRNA. (93 aa)
	PMAA_007040	60S ribosomal protein L22, putative. (124 aa)
	PMAA_011490	60S ribosomal protein L28. (155 aa)
	PMAA_013210	60S ribosomal protein L35Ae. (109 aa)
	PMAA_032570	Uncharacterized protein. (683 aa)
	PMAA_029710	Zn(2)-C6 fungal-type domain-containing protein. (866 aa)
	PMAA_029530	60S ribosomal protein L10. (223 aa)
	PMAA_019840	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	PMAA_019290	Uncharacterized protein. (178 aa)
	PMAA_038200	60S ribosomal protein L32. (130 aa)
	PMAA_018420	60S ribosomal protein L24a. (159 aa)
	PMAA_017670	Ribosomal protein L14. (147 aa)
	PMAA_036980	50S ribosomal subunit L7, putative. (351 aa)
	PMAA_002730	60S ribosomal protein L21, putative. (160 aa)
	PMAA_002700	Uncharacterized protein. (403 aa)
	PMAA_043860	60S ribosomal protein L35. (125 aa)
	PMAA_043120	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
	PMAA_042790	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (199 aa)
	PMAA_046890	Alkaline serine protease; Belongs to the universal ribosomal protein uL14 family. (139 aa)
	PMAA_053720	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (313 aa)
	PMAA_053340	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	PMAA_052810	Ribosomal protein L26. (135 aa)

Your Current Organism:

Talaromyces marneffei

NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PMAA_002700	PMAA_002730	B6QSU3	B6QSU6	Uncharacterized protein.	60S ribosomal protein L21, putative.	0.981
PMAA_002700	PMAA_007040	B6QSU3	B6QUB7	Uncharacterized protein.	60S ribosomal protein L22, putative.	0.966
PMAA_002700	PMAA_011490	B6QSU3	B6QV93	Uncharacterized protein.	60S ribosomal protein L28.	0.980
PMAA_002700	PMAA_013210	B6QSU3	B6QVQ0	Uncharacterized protein.	60S ribosomal protein L35Ae.	0.986
PMAA_002700	PMAA_017670	B6QSU3	B6Q1W9	Uncharacterized protein.	Ribosomal protein L14.	0.987
PMAA_002700	PMAA_018420	B6QSU3	B6Q2H6	Uncharacterized protein.	60S ribosomal protein L24a.	0.985
PMAA_002700	PMAA_019290	B6QSU3	B6Q343	Uncharacterized protein.	Uncharacterized protein.	0.912
PMAA_002700	PMAA_019840	B6QSU3	B6Q3I2	Uncharacterized protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.987
PMAA_002700	PMAA_024190	B6QSU3	B6Q652	Uncharacterized protein.	Ribosomal protein L16a; Belongs to the universal ribosomal protein uL13 family.	0.979
PMAA_002700	PMAA_026430	B6QSU3	B6Q832	Uncharacterized protein.	60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.966
PMAA_002700	PMAA_029530	B6QSU3	B6Q3P6	Uncharacterized protein.	60S ribosomal protein L10.	0.825
PMAA_002700	PMAA_029710	B6QSU3	B6Q3Y0	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.872
PMAA_002700	PMAA_032570	B6QSU3	B6Q5J3	Uncharacterized protein.	Uncharacterized protein.	0.922
PMAA_002700	PMAA_036980	B6QSU3	B6Q1Q6	Uncharacterized protein.	50S ribosomal subunit L7, putative.	0.799
PMAA_002700	PMAA_038200	B6QSU3	B6Q2T9	Uncharacterized protein.	60S ribosomal protein L32.	0.987
PMAA_002700	PMAA_042790	B6QSU3	B6QR34	Uncharacterized protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.987
PMAA_002700	PMAA_043120	B6QSU3	B6QR62	Uncharacterized protein.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.944
PMAA_002700	PMAA_043860	B6QSU3	B6QS60	Uncharacterized protein.	60S ribosomal protein L35.	0.986
PMAA_002700	PMAA_046890	B6QSU3	B6QP62	Uncharacterized protein.	Alkaline serine protease; Belongs to the universal ribosomal protein uL14 family.	0.952
PMAA_002700	PMAA_050440	B6QSU3	B6QMC4	Uncharacterized protein.	60S ribosomal protein L10 family protein.	0.825