30 items (Talaromyces marneffei) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

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protein homology

Your Input:
	PMAA_017890	Protein MAK16; Belongs to the MAK16 family. (327 aa)
	PMAA_028450	ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family. (503 aa)
	PMAA_019650	RNA helicase. (635 aa)
	PMAA_019940	Ribosome biogenesis protein Ssf2, putative. (442 aa)
	PMAA_021730	60S ribosomal subunit biogenesis protein Nop16, putative. (251 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (794 aa)
	PMAA_033560	Cell morphogenesis protein Las1, putative. (439 aa)
	PMAA_033570	Uncharacterized protein. (330 aa)
	PMAA_034360	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (184 aa)
	PMAA_034370	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (717 aa)
	PMAA_025580	AAA family ATPase/60S ribosome export protein Rix7, putative. (741 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (768 aa)
	PMAA_068700	F-box domain protein. (374 aa)
	PMAA_068710	60S ribosome biogenesis protein Brx1, putative. (363 aa)
	PMAA_072170	rRNA processing protein (Ebp2), putative. (365 aa)
	PMAA_073980	ATP-dependent RNA helicase (Drs1), putative. (826 aa)
	PMAA_066430	Ribosome assembly protein Noc2, putative. (744 aa)
	PMAA_086750	RNA processing factor 1. (412 aa)
	PMAA_079030	C2H2 finger domain protein, putative. (113 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (675 aa)
	PMAA_083060	DUF1665 domain protein. (295 aa)
	PMAA_085270	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (216 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (485 aa)
	PMAA_092250	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4898 aa)
	PMAA_056530	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (565 aa)
	PMAA_042700	Ribosomal RNA processing protein, putative. (338 aa)
	PMAA_049070	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (660 aa)
	PMAA_043940	PUM-HD domain-containing protein. (703 aa)
	PMAA_043820	GTP binding protein, putative. (549 aa)
	PMAA_013660	60S ribosomal protein Nsa2, putative. (617 aa)

Your Current Organism:

Talaromyces marneffei

NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	NOP7	B6Q718	B6QEM7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	PMAA_013660	B6Q718	B6QVY1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein Nsa2, putative.	0.986
ERB1	PMAA_017890	B6Q718	B6Q1Z2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Protein MAK16; Belongs to the MAK16 family.	0.955
ERB1	PMAA_019650	B6Q718	B6Q3F8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RNA helicase.	0.963
ERB1	PMAA_019940	B6Q718	B6Q3J2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein Ssf2, putative.	0.972
ERB1	PMAA_021730	B6Q718	B6Q4M6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal subunit biogenesis protein Nop16, putative.	0.974
ERB1	PMAA_025580	B6Q718	B6Q717	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	AAA family ATPase/60S ribosome export protein Rix7, putative.	0.816
ERB1	PMAA_028450	B6Q718	B6Q358	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family.	0.882
ERB1	PMAA_033560	B6Q718	B6Q675	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Cell morphogenesis protein Las1, putative.	0.715
ERB1	PMAA_033570	B6Q718	B6Q676	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.713
ERB1	PMAA_034360	B6Q718	B6Q6N0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.979
ERB1	PMAA_034370	B6Q718	B6Q6N1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.	0.988
ERB1	PMAA_042700	B6Q718	B6QR27	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosomal RNA processing protein, putative.	0.990
ERB1	PMAA_043820	B6Q718	B6QS56	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	GTP binding protein, putative.	0.999
ERB1	PMAA_043940	B6Q718	B6QS19	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	PUM-HD domain-containing protein.	0.732
ERB1	PMAA_049070	B6Q718	B6QRU2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.996
ERB1	PMAA_056530	B6Q718	B6QL85	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.975
ERB1	PMAA_066430	B6Q718	B6QBX8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome assembly protein Noc2, putative.	0.996
ERB1	PMAA_068700	B6Q718	B6Q8H2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	F-box domain protein.	0.949
ERB1	PMAA_068710	B6Q718	B6Q8H3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosome biogenesis protein Brx1, putative.	0.966