81 items (Talaromyces marneffei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

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gene co-occurrence

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co-expression

protein homology

Your Input:
	PMAA_032180	Uncharacterized protein. (364 aa)
	PMAA_044680	60S ribosomal protein L24b. (193 aa)
	PMAA_003800	Uncharacterized protein. (298 aa)
	PMAA_003820	RNA binding protein. (352 aa)
	PMAA_005260	U3 small nucleolar RNA-associated protein 22. (1110 aa)
	PMAA_005490	DUF652 domain protein. (190 aa)
	PMAA_005510	SnoRNA binding protein, putative. (1022 aa)
	PMAA_042920	Sas10/Utp3 family protein. (650 aa)
	PMAA_013660	60S ribosomal protein Nsa2, putative. (617 aa)
	PMAA_012140	Uncharacterized protein. (184 aa)
	rrp36	rRNA biogenesis protein rrp36; Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway (By similarity). (357 aa)
	PMAA_010700	Ribosomal small subunit assembly protein, putative. (326 aa)
	PMAA_011130	WD repeat protein. (885 aa)
	PMAA_009210	Ribosome biogenesis protein Noc4, putative. (560 aa)
	PMAA_005660	rRNA processing protein Bystin, putative. (507 aa)
	PMAA_042700	Ribosomal RNA processing protein, putative. (338 aa)
	PMAA_042440	CCAAT-box-binding transcription factor. (1120 aa)
	PMAA_040530	Small nucleolar ribonucleoprotein complex component (Utp5), putative. (851 aa)
	PMAA_048720	Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (537 aa)
	PMAA_048600	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (349 aa)
	PMAA_044780	Nuclear protein involved in pre-rRNA processing, putative. (320 aa)
	PMAA_046960	F-box domain protein. (1016 aa)
	PMAA_053720	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (313 aa)
	NAT10	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1063 aa)
	PMAA_052720	ATP-dependent RNA helicase DBP10. (948 aa)
	PMAA_052650	RNA helicase. (819 aa)
	PMAA_051830	rRNA processing protein, putative. (338 aa)
	PMAA_051800	Small nucleolar ribonucleoprotein complex subunit Dip2, putative. (957 aa)
	PMAA_061180	RNA helicase. (584 aa)
	PMAA_060200	rRNA maturation protein (Nop14), putative. (917 aa)
	PMAA_059850	RNA binding protein, putative. (540 aa)
	PMAA_059410	RNA-3'-phosphate cyclase family protein. (404 aa)
	PMAA_059200	Ribosome biogenesis protein, putative. (358 aa)
	PMAA_054660	Small nucleolar ribonucleoprotein complex subunit Utp14, putatrive. (969 aa)
	PMAA_096600	RING finger domain protein (Rnf10), putative. (732 aa)
	PMAA_094100	60S ribosome biogenesis protein Mak11, putative. (492 aa)
	PMAA_094000	Small nucleolar ribonucleoprotein complex subunit, putative. (631 aa)
	PMAA_092830	Pre-rRNA processing protein Tsr1, putative. (809 aa)
	PMAA_092820	Small nucleolar ribonucleoprotein complex subunit, putative. (540 aa)
	PMAA_086180	AAA family ATPase, putative. (742 aa)
	PMAA_085270	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (216 aa)
	PMAA_084500	Low-temperature viability protein ltv1. (489 aa)
	PMAA_083060	DUF1665 domain protein. (295 aa)
	PMAA_081980	Small nucleolar ribonucleoprotein complex subunit (Pwp2), putative. (882 aa)
	PMAA_089090	Uncharacterized protein. (179 aa)
	PMAA_079030	C2H2 finger domain protein, putative. (113 aa)
	PMAA_087990	C6 transcription factor, putative. (853 aa)
	PMAA_067630	U3 small nucleolar ribonucleoprotein protein IMP4, putative. (319 aa)
	PMAA_075760	DEAD/DEAH box helicase, putative. (904 aa)
	PMAA_066430	Ribosome assembly protein Noc2, putative. (744 aa)
	PMAA_066390	ATP dependent RNA helicase (Rok1), putative. (745 aa)
	PMAA_045820	rRNA processing protein Utp6, putative. (394 aa)
	PMAA_017890	Protein MAK16; Belongs to the MAK16 family. (327 aa)
	PMAA_027460	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (352 aa)
	PMAA_027470	Fungal specific transcription factor, putative. (738 aa)
	PMAA_027560	Ribosomal biogenesis protein Gar2. (453 aa)
	PMAA_037920	rRNA biogenesis protein RRP5, putative. (1807 aa)
	PMAA_018290	DEAH-box RNA helicase (Dhr1), putative. (1203 aa)
	PMAA_074440	U3 small nucleolar RNA-associated protein Utp11, putative. (285 aa)
	PMAA_072730	HEAT repeat protein (DRIM), putative. (2622 aa)
	PMAA_063030	Vesicle-mediated transport protein Bfr2/Che-1, putative. (491 aa)
	PMAA_070680	U3 small nucleolar ribonucleoprotein subunit (Imp3), putative. (188 aa)
	PMAA_068710	60S ribosome biogenesis protein Brx1, putative. (363 aa)
	PMAA_068700	F-box domain protein. (374 aa)
	PMAA_016360	Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (259 aa)
	PMAA_028310	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (685 aa)
	PMAA_028450	ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family. (503 aa)
	PMAA_028830	Small nucleolar ribonucleoprotein complex subunit, putative. (625 aa)
	PMAA_019650	RNA helicase. (635 aa)
	PMAA_019890	Small nucleolar ribonucleoprotein complex subunit (SOF1), putative. (446 aa)
	PMAA_030300	WD repeat protein. (744 aa)
	PMAA_031010	RIO1 family protein kinase, putative. (423 aa)
	utp25	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (734 aa)
	PMAA_025340	Ribosomal protein S23 (S12); Belongs to the universal ribosomal protein uS12 family. (145 aa)
	PMAA_034370	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (717 aa)
	PMAA_034360	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (184 aa)
	PMAA_034210	Uncharacterized protein. (898 aa)
	PMAA_023640	ATP dependent RNA helicase (Dbp8), putative; Belongs to the DEAD box helicase family. (538 aa)
	nop9	Nucleolar protein 9; RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit (By similarity); Belongs to the NOP9 family. (697 aa)
	PMAA_021730	60S ribosomal subunit biogenesis protein Nop16, putative. (251 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (794 aa)

Your Current Organism:

Talaromyces marneffei

NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NAT10	PMAA_003820	B6QNQ7	B6QT18	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	RNA binding protein.	0.496
NAT10	PMAA_005260	B6QNQ7	B6QTJ8	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	U3 small nucleolar RNA-associated protein 22.	0.998
NAT10	PMAA_005490	B6QNQ7	B6QTN6	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	DUF652 domain protein.	0.972
NAT10	PMAA_005510	B6QNQ7	B6QTN8	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	SnoRNA binding protein, putative.	0.998
NAT10	PMAA_005660	B6QNQ7	B6QTQ3	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	rRNA processing protein Bystin, putative.	0.998
NAT10	PMAA_009210	B6QNQ7	B6QUH8	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Ribosome biogenesis protein Noc4, putative.	0.996
NAT10	PMAA_010700	B6QNQ7	B6QV12	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Ribosomal small subunit assembly protein, putative.	0.994
NAT10	PMAA_011130	B6QNQ7	B6QUX1	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	WD repeat protein.	0.986
NAT10	PMAA_016360	B6QNQ7	B6Q7V3	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.401
NAT10	PMAA_017890	B6QNQ7	B6Q1Z2	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Protein MAK16; Belongs to the MAK16 family.	0.536
NAT10	PMAA_018290	B6QNQ7	B6Q2G3	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	DEAH-box RNA helicase (Dhr1), putative.	0.937
NAT10	PMAA_019650	B6QNQ7	B6Q3F8	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	RNA helicase.	0.672
NAT10	PMAA_019890	B6QNQ7	B6Q3I7	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Small nucleolar ribonucleoprotein complex subunit (SOF1), putative.	0.980
NAT10	PMAA_023640	B6QNQ7	B6Q5S8	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	ATP dependent RNA helicase (Dbp8), putative; Belongs to the DEAD box helicase family.	0.700
NAT10	PMAA_025340	B6QNQ7	B6Q6Y9	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Ribosomal protein S23 (S12); Belongs to the universal ribosomal protein uS12 family.	0.962
NAT10	PMAA_027560	B6QNQ7	B6Q236	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Ribosomal biogenesis protein Gar2.	0.729
NAT10	PMAA_028310	B6QNQ7	B6Q2Q5	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.985
NAT10	PMAA_028450	B6QNQ7	B6Q358	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family.	0.651
NAT10	PMAA_028830	B6QNQ7	B6Q3A0	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Small nucleolar ribonucleoprotein complex subunit, putative.	0.995
NAT10	PMAA_030300	B6QNQ7	B6Q441	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	WD repeat protein.	0.999