12 items (Talaromyces marneffei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PMAA_092830	Pre-rRNA processing protein Tsr1, putative. (809 aa)
	PMAA_027560	Ribosomal biogenesis protein Gar2. (453 aa)
	PMAA_031010	RIO1 family protein kinase, putative. (423 aa)
	nop9	Nucleolar protein 9; RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit (By similarity); Belongs to the NOP9 family. (697 aa)
	PMAA_072730	HEAT repeat protein (DRIM), putative. (2622 aa)
	PMAA_089090	Uncharacterized protein. (179 aa)
	PMAA_084500	Low-temperature viability protein ltv1. (489 aa)
	PMAA_009210	Ribosome biogenesis protein Noc4, putative. (560 aa)
	PMAA_005660	rRNA processing protein Bystin, putative. (507 aa)
	PMAA_042700	Ribosomal RNA processing protein, putative. (338 aa)
	PMAA_044780	Nuclear protein involved in pre-rRNA processing, putative. (320 aa)
	PMAA_060200	rRNA maturation protein (Nop14), putative. (917 aa)

Your Current Organism:

Talaromyces marneffei

NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PMAA_005660	PMAA_009210	B6QTQ3	B6QUH8	rRNA processing protein Bystin, putative.	Ribosome biogenesis protein Noc4, putative.	0.998
PMAA_005660	PMAA_027560	B6QTQ3	B6Q236	rRNA processing protein Bystin, putative.	Ribosomal biogenesis protein Gar2.	0.846
PMAA_005660	PMAA_031010	B6QTQ3	B6Q4H9	rRNA processing protein Bystin, putative.	RIO1 family protein kinase, putative.	0.995
PMAA_005660	PMAA_042700	B6QTQ3	B6QR27	rRNA processing protein Bystin, putative.	Ribosomal RNA processing protein, putative.	0.812
PMAA_005660	PMAA_060200	B6QTQ3	B6QMB2	rRNA processing protein Bystin, putative.	rRNA maturation protein (Nop14), putative.	0.998
PMAA_005660	PMAA_072730	B6QTQ3	B6QA31	rRNA processing protein Bystin, putative.	HEAT repeat protein (DRIM), putative.	0.995
PMAA_005660	PMAA_084500	B6QTQ3	B6QG62	rRNA processing protein Bystin, putative.	Low-temperature viability protein ltv1.	0.999
PMAA_005660	PMAA_092830	B6QTQ3	B6QH06	rRNA processing protein Bystin, putative.	Pre-rRNA processing protein Tsr1, putative.	0.999
PMAA_005660	nop9	B6QTQ3	B6Q5P5	rRNA processing protein Bystin, putative.	Nucleolar protein 9; RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit (By similarity); Belongs to the NOP9 family.	0.909
PMAA_009210	PMAA_005660	B6QUH8	B6QTQ3	Ribosome biogenesis protein Noc4, putative.	rRNA processing protein Bystin, putative.	0.998
PMAA_009210	PMAA_027560	B6QUH8	B6Q236	Ribosome biogenesis protein Noc4, putative.	Ribosomal biogenesis protein Gar2.	0.717
PMAA_009210	PMAA_031010	B6QUH8	B6Q4H9	Ribosome biogenesis protein Noc4, putative.	RIO1 family protein kinase, putative.	0.669
PMAA_009210	PMAA_042700	B6QUH8	B6QR27	Ribosome biogenesis protein Noc4, putative.	Ribosomal RNA processing protein, putative.	0.838
PMAA_009210	PMAA_060200	B6QUH8	B6QMB2	Ribosome biogenesis protein Noc4, putative.	rRNA maturation protein (Nop14), putative.	0.999
PMAA_009210	PMAA_072730	B6QUH8	B6QA31	Ribosome biogenesis protein Noc4, putative.	HEAT repeat protein (DRIM), putative.	0.999
PMAA_009210	PMAA_084500	B6QUH8	B6QG62	Ribosome biogenesis protein Noc4, putative.	Low-temperature viability protein ltv1.	0.773
PMAA_009210	PMAA_092830	B6QUH8	B6QH06	Ribosome biogenesis protein Noc4, putative.	Pre-rRNA processing protein Tsr1, putative.	0.732
PMAA_009210	nop9	B6QUH8	B6Q5P5	Ribosome biogenesis protein Noc4, putative.	Nucleolar protein 9; RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit (By similarity); Belongs to the NOP9 family.	0.459
PMAA_027560	PMAA_005660	B6Q236	B6QTQ3	Ribosomal biogenesis protein Gar2.	rRNA processing protein Bystin, putative.	0.846
PMAA_027560	PMAA_009210	B6Q236	B6QUH8	Ribosomal biogenesis protein Gar2.	Ribosome biogenesis protein Noc4, putative.	0.717