STRINGSTRING
PMAA_101010 PMAA_101010 PMAA_015080 PMAA_015080 PMAA_025940 PMAA_025940 PMAA_066570 PMAA_066570 PMAA_023930 PMAA_023930 PMAA_061420 PMAA_061420 PMAA_055570 PMAA_055570
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PMAA_101010Oxidoreductase, putative. (643 aa)
PMAA_015080Prolyl 4-hydroxylase alpha subunit, putative. (257 aa)
PMAA_025940Fe2OG dioxygenase domain-containing protein. (263 aa)
PMAA_066570Prolyl 4-hydroxylase alpha subunit, putative. (293 aa)
PMAA_023930Oxidoreductase, 2OG-Fe(II) oxygenase family. (286 aa)
PMAA_061420P4Hc domain-containing protein. (281 aa)
PMAA_055570Fe2OG dioxygenase domain-containing protein. (459 aa)
Your Current Organism:
Talaromyces marneffei
NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224
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