15 items (Talaromyces marneffei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PMAA_018730	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family. (522 aa)
	PMAA_031470	Rab small monomeric GTPase Rab7, putative. (206 aa)
	PMAA_023760	RAB GTPase Vps21/Ypt51, putative. (262 aa)
	PMAA_036700	RAS small monomeric GTPase Rab6, putative. (209 aa)
	PMAA_068560	Ras GTPase Rab11, putative. (211 aa)
	PMAA_088550	Uncharacterized protein. (568 aa)
	PMAA_088560	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (335 aa)
	PMAA_086190	Rab GTPase SrgA, putative. (206 aa)
	PMAA_086200	Uncharacterized protein. (646 aa)
	PMAA_094580	RAB GTPase Ypt5, putative. (218 aa)
	PMAA_095620	Secretion related GTPase SrgD. (276 aa)
	PMAA_040550	Geranylgeranyl transferae type II alpha subunit, putative. (352 aa)
	PMAA_005030	Anucleate primary sterigmata (ApsB), putative. (1499 aa)
	PMAA_006390	Ras-like GTP-binding protein, putative. (314 aa)
	PMAA_011070	Ras family GTPase (Rab4b), putative. (359 aa)

Your Current Organism:

Talaromyces marneffei

NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PMAA_005030	PMAA_006390	B6QTG2	B6QTY0	Anucleate primary sterigmata (ApsB), putative.	Ras-like GTP-binding protein, putative.	0.404
PMAA_005030	PMAA_011070	B6QTG2	B6QUW5	Anucleate primary sterigmata (ApsB), putative.	Ras family GTPase (Rab4b), putative.	0.400
PMAA_005030	PMAA_018730	B6QTG2	B6Q2K8	Anucleate primary sterigmata (ApsB), putative.	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.	0.933
PMAA_005030	PMAA_023760	B6QTG2	B6Q5U1	Anucleate primary sterigmata (ApsB), putative.	RAB GTPase Vps21/Ypt51, putative.	0.404
PMAA_005030	PMAA_031470	B6QTG2	B6Q4U4	Anucleate primary sterigmata (ApsB), putative.	Rab small monomeric GTPase Rab7, putative.	0.692
PMAA_005030	PMAA_036700	B6QTG2	B6Q8C7	Anucleate primary sterigmata (ApsB), putative.	RAS small monomeric GTPase Rab6, putative.	0.798
PMAA_005030	PMAA_040550	B6QTG2	B6QQ55	Anucleate primary sterigmata (ApsB), putative.	Geranylgeranyl transferae type II alpha subunit, putative.	0.830
PMAA_005030	PMAA_068560	B6QTG2	B6Q8F7	Anucleate primary sterigmata (ApsB), putative.	Ras GTPase Rab11, putative.	0.838
PMAA_005030	PMAA_086190	B6QTG2	B6QGP5	Anucleate primary sterigmata (ApsB), putative.	Rab GTPase SrgA, putative.	0.841
PMAA_005030	PMAA_086200	B6QTG2	B6QGP6	Anucleate primary sterigmata (ApsB), putative.	Uncharacterized protein.	0.841
PMAA_005030	PMAA_088550	B6QTG2	B6QE39	Anucleate primary sterigmata (ApsB), putative.	Uncharacterized protein.	0.807
PMAA_005030	PMAA_088560	B6QTG2	B6QE40	Anucleate primary sterigmata (ApsB), putative.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.807
PMAA_005030	PMAA_094580	B6QTG2	B6QHK7	Anucleate primary sterigmata (ApsB), putative.	RAB GTPase Ypt5, putative.	0.404
PMAA_005030	PMAA_095620	B6QTG2	B6QHW3	Anucleate primary sterigmata (ApsB), putative.	Secretion related GTPase SrgD.	0.663
PMAA_006390	PMAA_005030	B6QTY0	B6QTG2	Ras-like GTP-binding protein, putative.	Anucleate primary sterigmata (ApsB), putative.	0.404
PMAA_006390	PMAA_011070	B6QTY0	B6QUW5	Ras-like GTP-binding protein, putative.	Ras family GTPase (Rab4b), putative.	0.480
PMAA_006390	PMAA_018730	B6QTY0	B6Q2K8	Ras-like GTP-binding protein, putative.	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.	0.691
PMAA_006390	PMAA_031470	B6QTY0	B6Q4U4	Ras-like GTP-binding protein, putative.	Rab small monomeric GTPase Rab7, putative.	0.592
PMAA_006390	PMAA_036700	B6QTY0	B6Q8C7	Ras-like GTP-binding protein, putative.	RAS small monomeric GTPase Rab6, putative.	0.540
PMAA_006390	PMAA_040550	B6QTY0	B6QQ55	Ras-like GTP-binding protein, putative.	Geranylgeranyl transferae type II alpha subunit, putative.	0.699