10 items (Talaromyces marneffei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PMAA_031470	Rab small monomeric GTPase Rab7, putative. (206 aa)
	PMAA_023760	RAB GTPase Vps21/Ypt51, putative. (262 aa)
	PMAA_036700	RAS small monomeric GTPase Rab6, putative. (209 aa)
	PMAA_068560	Ras GTPase Rab11, putative. (211 aa)
	PMAA_086190	Rab GTPase SrgA, putative. (206 aa)
	PMAA_094580	RAB GTPase Ypt5, putative. (218 aa)
	PMAA_095450	Aminopeptidase, putative. (1176 aa)
	PMAA_095620	Secretion related GTPase SrgD. (276 aa)
	PMAA_006390	Ras-like GTP-binding protein, putative. (314 aa)
	PMAA_011070	Ras family GTPase (Rab4b), putative. (359 aa)

Your Current Organism:

Talaromyces marneffei

NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PMAA_006390	PMAA_011070	B6QTY0	B6QUW5	Ras-like GTP-binding protein, putative.	Ras family GTPase (Rab4b), putative.	0.480
PMAA_006390	PMAA_031470	B6QTY0	B6Q4U4	Ras-like GTP-binding protein, putative.	Rab small monomeric GTPase Rab7, putative.	0.592
PMAA_006390	PMAA_036700	B6QTY0	B6Q8C7	Ras-like GTP-binding protein, putative.	RAS small monomeric GTPase Rab6, putative.	0.540
PMAA_006390	PMAA_068560	B6QTY0	B6Q8F7	Ras-like GTP-binding protein, putative.	Ras GTPase Rab11, putative.	0.504
PMAA_006390	PMAA_086190	B6QTY0	B6QGP5	Ras-like GTP-binding protein, putative.	Rab GTPase SrgA, putative.	0.473
PMAA_006390	PMAA_095620	B6QTY0	B6QHW3	Ras-like GTP-binding protein, putative.	Secretion related GTPase SrgD.	0.453
PMAA_011070	PMAA_006390	B6QUW5	B6QTY0	Ras family GTPase (Rab4b), putative.	Ras-like GTP-binding protein, putative.	0.480
PMAA_011070	PMAA_023760	B6QUW5	B6Q5U1	Ras family GTPase (Rab4b), putative.	RAB GTPase Vps21/Ypt51, putative.	0.479
PMAA_011070	PMAA_031470	B6QUW5	B6Q4U4	Ras family GTPase (Rab4b), putative.	Rab small monomeric GTPase Rab7, putative.	0.484
PMAA_011070	PMAA_036700	B6QUW5	B6Q8C7	Ras family GTPase (Rab4b), putative.	RAS small monomeric GTPase Rab6, putative.	0.623
PMAA_011070	PMAA_086190	B6QUW5	B6QGP5	Ras family GTPase (Rab4b), putative.	Rab GTPase SrgA, putative.	0.727
PMAA_011070	PMAA_094580	B6QUW5	B6QHK7	Ras family GTPase (Rab4b), putative.	RAB GTPase Ypt5, putative.	0.478
PMAA_023760	PMAA_011070	B6Q5U1	B6QUW5	RAB GTPase Vps21/Ypt51, putative.	Ras family GTPase (Rab4b), putative.	0.479
PMAA_023760	PMAA_031470	B6Q5U1	B6Q4U4	RAB GTPase Vps21/Ypt51, putative.	Rab small monomeric GTPase Rab7, putative.	0.647
PMAA_023760	PMAA_036700	B6Q5U1	B6Q8C7	RAB GTPase Vps21/Ypt51, putative.	RAS small monomeric GTPase Rab6, putative.	0.540
PMAA_023760	PMAA_068560	B6Q5U1	B6Q8F7	RAB GTPase Vps21/Ypt51, putative.	Ras GTPase Rab11, putative.	0.514
PMAA_023760	PMAA_086190	B6Q5U1	B6QGP5	RAB GTPase Vps21/Ypt51, putative.	Rab GTPase SrgA, putative.	0.481
PMAA_023760	PMAA_094580	B6Q5U1	B6QHK7	RAB GTPase Vps21/Ypt51, putative.	RAB GTPase Ypt5, putative.	0.905
PMAA_023760	PMAA_095620	B6Q5U1	B6QHW3	RAB GTPase Vps21/Ypt51, putative.	Secretion related GTPase SrgD.	0.438
PMAA_031470	PMAA_006390	B6Q4U4	B6QTY0	Rab small monomeric GTPase Rab7, putative.	Ras-like GTP-binding protein, putative.	0.592