41 items (Talaromyces marneffei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PMAA_017450	Isocitrate lyase. (594 aa)
	PMAA_017460	Citrate synthase; Belongs to the citrate synthase family. (467 aa)
	PMAA_017710	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Belongs to the catalase family. (745 aa)
	PMAA_021040	Malate synthase; Belongs to the malate synthase family. (539 aa)
	PMAA_021050	Glutamine synthetase, putative; Belongs to the glutamine synthetase family. (484 aa)
	PMAA_021640	Dihydrodipicolinate synthetase family protein. (323 aa)
	PMAA_025370	Aminotransferase, class V, putative. (386 aa)
	PMAA_016050	Acetyl-CoA-acetyltransferase, putative; Belongs to the thiolase-like superfamily. Thiolase family. (428 aa)
	PMAA_070220	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (535 aa)
	PMAA_062450	2-hydroxyacid dehydrogenase, putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (344 aa)
	PMAA_065540	Hydroxyisocaproate dehydrogenase, putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (348 aa)
	PMAA_066970	D-isomer specific 2-hydroxyacid dehydrogenase family protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (338 aa)
	PMAA_087680	Dihydrolipoyl dehydrogenase. (510 aa)
	PMAA_079040	Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (785 aa)
	PMAA_088600	Uncharacterized protein. (316 aa)
	PMAA_080470	Isocitrate lyase. (540 aa)
	PMAA_080700	Glutamine synthetase. (341 aa)
	PMAA_084040	Dihydrodipicolinate synthetase family protein; Belongs to the DapA family. (334 aa)
	PMAA_095310	Citrate synthase; Belongs to the citrate synthase family. (472 aa)
	PMAA_097710	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (170 aa)
	PMAA_099590	Dihydrodipicolinate synthase, putative; Belongs to the DapA family. (326 aa)
	PMAA_090720	FluG family protein; Belongs to the glutamine synthetase family. (457 aa)
	PMAA_100580	Dihydrodipicolinate synthase, putative; Belongs to the DapA family. (310 aa)
	PMAA_091390	Citrate synthase; Belongs to the citrate synthase family. (463 aa)
	PMAA_091680	Malate dehydrogenase. (340 aa)
	PMAA_060380	Acetyl-CoA acetyltransferase, putative; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)
	PMAA_051550	FMN-dependent dehydrogenase family protein. (380 aa)
	PMAA_047760	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. (500 aa)
	PMAA_039050	Dihydrodipicolinate synthase, putative; Belongs to the DapA family. (327 aa)
	PMAA_041020	Acetyl-coenzyme A synthetase. (668 aa)
	PMAA_042470	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (485 aa)
	PMAA_041860	Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (334 aa)
	PMAA_045410	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (471 aa)
	PMAA_005900	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1073 aa)
	PMAA_006740	D-mandelate dehydrogenase, putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (344 aa)
	PMAA_009180	Formamidase FmdS. (415 aa)
	PMAA_009780	Dihydrodipicolinate synthetase family protein; Belongs to the DapA family. (303 aa)
	PMAA_011780	Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. (406 aa)
	PMAA_011500	Malate dehydrogenase. (331 aa)
	PMAA_012780	2-hydroxyacid dehydrogenase, putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (343 aa)
	PMAA_014760	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Belongs to the catalase family. (734 aa)

Your Current Organism:

Talaromyces marneffei

NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PMAA_005900	PMAA_011500	B6QTT0	B6QV95	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Malate dehydrogenase.	0.671
PMAA_005900	PMAA_021040	B6QTT0	B6Q490	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Malate synthase; Belongs to the malate synthase family.	0.451
PMAA_005900	PMAA_021050	B6QTT0	B6Q491	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Glutamine synthetase, putative; Belongs to the glutamine synthetase family.	0.847
PMAA_005900	PMAA_025370	B6QTT0	B6Q6Z2	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Aminotransferase, class V, putative.	0.963
PMAA_005900	PMAA_042470	B6QTT0	B6QQL7	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	0.999
PMAA_005900	PMAA_045410	B6QTT0	B6QQZ0	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.990
PMAA_005900	PMAA_066970	B6QTT0	B6QC97	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	D-isomer specific 2-hydroxyacid dehydrogenase family protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.577
PMAA_005900	PMAA_070220	B6QTT0	B6Q8Y0	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.990
PMAA_005900	PMAA_079040	B6QTT0	B6QE06	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.	0.416
PMAA_005900	PMAA_080470	B6QTT0	B6QEU2	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Isocitrate lyase.	0.556
PMAA_005900	PMAA_080700	B6QTT0	B6QF17	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Glutamine synthetase.	0.848
PMAA_005900	PMAA_087680	B6QTT0	B6QDG2	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Dihydrolipoyl dehydrogenase.	0.969
PMAA_005900	PMAA_090720	B6QTT0	B6QJC8	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	FluG family protein; Belongs to the glutamine synthetase family.	0.847
PMAA_005900	PMAA_091680	B6QTT0	B6QJU6	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Malate dehydrogenase.	0.671
PMAA_005900	PMAA_097710	B6QTT0	B6QII7	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	0.999
PMAA_006740	PMAA_009780	B6QU88	B6QUQ7	D-mandelate dehydrogenase, putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Dihydrodipicolinate synthetase family protein; Belongs to the DapA family.	0.721
PMAA_006740	PMAA_017450	B6QU88	B6Q1G8	D-mandelate dehydrogenase, putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Isocitrate lyase.	0.905
PMAA_006740	PMAA_021040	B6QU88	B6Q490	D-mandelate dehydrogenase, putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Malate synthase; Belongs to the malate synthase family.	0.914
PMAA_006740	PMAA_021640	B6QU88	B6Q4L7	D-mandelate dehydrogenase, putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Dihydrodipicolinate synthetase family protein.	0.721
PMAA_006740	PMAA_025370	B6QU88	B6Q6Z2	D-mandelate dehydrogenase, putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Aminotransferase, class V, putative.	0.944