(78 nodes) Mixed, incl. ABC transporter-like, ATP-binding domain, and ABC-2 family transporter protein network (Paenibacillus durus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AIQ10994.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
	AIQ10995.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)
	AIQ10996.1	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
	AIQ10997.1	Sodium ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
	AIQ10998.1	Potassium ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)
	AIQ11001.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (591 aa)
	AIQ11113.1	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
	AIQ11114.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)
	AIQ11115.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
	AIQ11116.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
	AIQ11246.1	Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
	AIQ11437.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (565 aa)
	AIQ11471.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
	AIQ11472.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
	AIQ11525.1	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
	AIQ11526.1	Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. (565 aa)
	AIQ11527.1	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
	AIQ11528.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
	AIQ11529.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (677 aa)
	AIQ11530.1	DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (173 aa)
	AIQ11587.1	Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
	AIQ11588.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
	AIQ11672.1	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (611 aa)
	AIQ11857.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (654 aa)
	AIQ12003.1	Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
	AIQ12004.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
	AIQ12005.1	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)
	AIQ12007.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (69 aa)
	AIQ12077.1	Membrane protease regulatory membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
	AIQ12078.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)
	AIQ12079.1	PtsGHI operon antiterminator; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
	AIQ12151.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (586 aa)
	AIQ12152.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (605 aa)
	AIQ12480.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (575 aa)
	AIQ12568.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (69 aa)
	AIQ12570.1	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (291 aa)
	AIQ12571.1	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (600 aa)
	AIQ12572.1	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (579 aa)
	AIQ12942.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
	AIQ12943.1	Glycosyl transferase family 8; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
	AIQ12944.1	Pentapeptide repeat protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
	AIQ12945.1	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)
	AIQ13066.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
	AIQ13067.1	Sodium ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
	AIQ13068.1	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (125 aa)
	AIQ13126.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)
	AIQ13127.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
	AIQ13128.1	PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)
	AIQ13229.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (580 aa)
	AIQ13230.1	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (698 aa)
	AIQ13231.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
	AIQ13439.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)
	AIQ13440.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	AIQ13602.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (69 aa)
	AIQ14119.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
	AIQ14120.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
	AIQ14121.1	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
	AIQ14735.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (763 aa)
	AIQ14736.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
	AIQ14737.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (641 aa)
	AIQ14780.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
	AIQ14781.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
	AIQ14782.1	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	AIQ14905.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (633 aa)
	AIQ14906.1	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (581 aa)
	AIQ14907.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
	AIQ14908.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (78 aa)
	AIQ14909.1	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (295 aa)
	AIQ14968.1	Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology. (716 aa)
	AIQ14970.1	Lantibiotic immunity protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
	AIQ14971.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
	AIQ14972.1	LanY; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)
	AIQ14973.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (71 aa)
	AIQ14974.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (87 aa)
	AIQ14975.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
	AIQ14976.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
	AIQ15054.1	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. (318 aa)
	AIQ15055.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)

Your Current Organism:

Paenibacillus durus

NCBI taxonomy Id: 44251
Other names: ATCC 27763, ATCC 35681 [[Paenibacillus azotofixans]], Bacillus azotifixans, Bacillus azotofixans, CIP 104586 [[Paenibacillus azotofixans]], Clostridium durum, DSM 5976 [[Paenibacillus azotofixans]], LMG 14658 [[Paenibacillus azotofixans]], LMG:14658 [[Paenibacillus azotofixans]], P. durus, Paenibacillus azotofixans, Paenibacillus durum, VPI 6563, bacterium ISSDS-862, strain P3L-5 [[Paenibacillus azotofixans]]

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIQ10994.1	AIQ10995.1	PDUR_02445	PDUR_02450	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
AIQ10994.1	AIQ10996.1	PDUR_02445	PDUR_02455	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
AIQ10994.1	AIQ10997.1	PDUR_02445	PDUR_02460	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sodium ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
AIQ10994.1	AIQ10998.1	PDUR_02445	PDUR_02465	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Potassium ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
AIQ10995.1	AIQ10994.1	PDUR_02450	PDUR_02445	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
AIQ10995.1	AIQ10996.1	PDUR_02450	PDUR_02455	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
AIQ10995.1	AIQ10997.1	PDUR_02450	PDUR_02460	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sodium ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.831
AIQ10995.1	AIQ10998.1	PDUR_02450	PDUR_02465	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Potassium ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.826
AIQ10995.1	AIQ13067.1	PDUR_02450	PDUR_14945	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sodium ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.718
AIQ10996.1	AIQ10994.1	PDUR_02455	PDUR_02445	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
AIQ10996.1	AIQ10995.1	PDUR_02455	PDUR_02450	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
AIQ10996.1	AIQ10997.1	PDUR_02455	PDUR_02460	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sodium ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.869
AIQ10996.1	AIQ10998.1	PDUR_02455	PDUR_02465	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Potassium ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.843
AIQ10996.1	AIQ11527.1	PDUR_02455	PDUR_05885	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.557
AIQ10996.1	AIQ11588.1	PDUR_02455	PDUR_06210	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
AIQ10996.1	AIQ13068.1	PDUR_02455	PDUR_14950	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
AIQ10996.1	AIQ13439.1	PDUR_02455	PDUR_17090	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
AIQ10996.1	AIQ14970.1	PDUR_02455	PDUR_26170	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lantibiotic immunity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
AIQ10996.1	AIQ15054.1	PDUR_02455	PDUR_26655	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family.	0.606
AIQ10997.1	AIQ10994.1	PDUR_02460	PDUR_02445	Sodium ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784

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