STRINGSTRING
BLA_1090 BLA_1090 BLA_1091 BLA_1091 BLA_1092 BLA_1092 oppD oppD oppF oppF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BLA_1090Solute binding protein of ABC transporter system for peptides; COG0747: ABC-type dipeptide transport system, periplasmic component. (576 aa)
BLA_1091Putative ABC transporter permease protein for peptides; COG0601: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (320 aa)
BLA_1092Probable ABC transporter permease protein for peptides; COG1173: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (294 aa)
oppDProbable ATP-binding protein of ABC transporter system for peptides; COG4172: ABC-type uncharacterized transport system, duplicated ATPase component. (265 aa)
oppFProbable ATP binding protein of ABC transporter for peptides; COG4608: ABC-type oligopeptide transport system, ATPase component. (262 aa)
Your Current Organism:
Bifidobacterium animalis
NCBI taxonomy Id: 442563
Other names: B. animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis str. AD011, Bifidobacterium animalis subsp. lactis strain AD011, Bifidobacterium lactis AD011
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