STRINGSTRING
BLA_0350 BLA_0350 BLA_0351 BLA_0351 BLA_0352 BLA_0352 BLA_0526 BLA_0526 vsr-2 vsr-2 BLA_0528 BLA_0528
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BLA_0350Possible 2-hydroxyacid dehydrogenase; COG0111: Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (335 aa)
BLA_0351Thymidylate synthase; COG1739: Uncharacterized conserved protein. (211 aa)
BLA_0352AbrB family trancriptional regulator fused to LRR containing domain. (228 aa)
BLA_0526COG0436: Aspartate/tyrosine/aromatic aminotransferase. (409 aa)
vsr-2Possible XorII very-short-patch-repair endonuclease; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination. (164 aa)
BLA_0528Conserved hypothetical protein. (522 aa)
Your Current Organism:
Bifidobacterium animalis
NCBI taxonomy Id: 442563
Other names: B. animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis str. AD011, Bifidobacterium animalis subsp. lactis strain AD011, Bifidobacterium lactis AD011
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