STRINGSTRING
BLA_0022 BLA_0022 BLA_0271 BLA_0271 BLA_0273 BLA_0273 BLA_0820 BLA_0820 BLA_0821 BLA_0821 BLA_1027 BLA_1027 BLA_1028 BLA_1028 BLA_1029 BLA_1029 BLA_1149 BLA_1149 BLA_1150 BLA_1150
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BLA_0022COG0431: Predicted flavoprotein. (182 aa)
BLA_0271COG0667: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). (335 aa)
BLA_0273Permeases of the major facilitator superfamily. (206 aa)
BLA_0820Possible permease protein of ABC transporter system; COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (270 aa)
BLA_0821Possible solute binding protein of ABC transporter; COG0715: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (360 aa)
BLA_1027Putative ABC transporter ATP-binding protein; COG1116: ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component. (269 aa)
BLA_1028Extracellular solute-binding protein, family 3 precursor; COG0715: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (321 aa)
BLA_1029Binding-protein-dependent transport systems inner membrane component precursor; COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (302 aa)
BLA_1149Putative membrane protein. (224 aa)
BLA_1150Hypothetical protein. (194 aa)
Your Current Organism:
Bifidobacterium animalis
NCBI taxonomy Id: 442563
Other names: B. animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis str. AD011, Bifidobacterium animalis subsp. lactis strain AD011, Bifidobacterium lactis AD011
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