STRINGSTRING
msmF msmF msmG msmG gluD gluD gluC gluC BLA_1092 BLA_1092 BLA_1091 BLA_1091 BLA_1082 BLA_1082 BLA_1047 BLA_1047 BLA_1046 BLA_1046 BLA_1029 BLA_1029 BLA_0963 BLA_0963 BLA_0911 BLA_0911 BLA_0910 BLA_0910 BLA_0905 BLA_0905 BLA_0904 BLA_0904 BLA_0848 BLA_0848 BLA_0846 BLA_0846 BLA_0845 BLA_0845 BLA_0820 BLA_0820 BLA_0772 BLA_0772 BLA_0771 BLA_0771 dppB dppB dppC dppC BLA_0622 BLA_0622 BLA_0464 BLA_0464 BLA_0463 BLA_0463 pstA pstA pstC pstC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
msmFCOG1175: ABC-type sugar transport systems, permease components. (314 aa)
msmGCOG0395: ABC-type sugar transport system, permease component. (301 aa)
gluDPermease protein of ABC transporter for glutamate; COG0765: ABC-type amino acid transport system, permease component. (363 aa)
gluCPermease protein of ABC transporter for glutamate; COG0765: ABC-type amino acid transport system, permease component. (225 aa)
BLA_1092Probable ABC transporter permease protein for peptides; COG1173: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (294 aa)
BLA_1091Putative ABC transporter permease protein for peptides; COG0601: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (320 aa)
BLA_1082COG0765: ABC-type amino acid transport system, permease component. (328 aa)
BLA_1047Putative binding protein-dependent transporter; COG0395: ABC-type sugar transport system, permease component. (289 aa)
BLA_1046Putative binding protein-dependent transporter; COG1175: ABC-type sugar transport systems, permease components. (238 aa)
BLA_1029Binding-protein-dependent transport systems inner membrane component precursor; COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (302 aa)
BLA_0963COG2011: ABC-type metal ion transport system, permease component. (236 aa)
BLA_0911Permease of ABC transporter possibly for oligosaccharides; COG1175: ABC-type sugar transport systems, permease components. (307 aa)
BLA_0910Permease of ABC transporter possibly for oligosaccharides; COG0395: ABC-type sugar transport system, permease component. (278 aa)
BLA_0905COG1175: ABC-type sugar transport systems, permease components. (469 aa)
BLA_0904Putative sugar ABC transport system membrane protein; COG3833: ABC-type maltose transport systems, permease component. (322 aa)
BLA_0848ABC transporter permease; COG2011: ABC-type metal ion transport system, permease component. (219 aa)
BLA_0846COG0765: ABC-type amino acid transport system, permease component. (218 aa)
BLA_0845COG0765: ABC-type amino acid transport system, permease component. (224 aa)
BLA_0820Possible permease protein of ABC transporter system; COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (270 aa)
BLA_0772Probable permease of ABC transporter for peptides; COG0601: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (363 aa)
BLA_0771Probable permease of ABC transporter for peptides; COG1173: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (405 aa)
dppBProbable permease protein of ABC-transporter for peptides; COG0601: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (308 aa)
dppCProbable permease protein of ABC-transporter for peptides; COG1173: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (318 aa)
BLA_0622Putative sugar transport integral membrane protein; COG0395: ABC-type sugar transport system, permease component. (229 aa)
BLA_0464Probable permease of ABC transporter system for sugars; COG1175: ABC-type sugar transport systems, permease components. (322 aa)
BLA_0463Probable permease of ABC transporter system for sugars; COG0395: ABC-type sugar transport system, permease component. (326 aa)
pstACOG0581: ABC-type phosphate transport system, permease component. (330 aa)
pstCPhosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (326 aa)
Your Current Organism:
Bifidobacterium animalis
NCBI taxonomy Id: 442563
Other names: B. animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis str. AD011, Bifidobacterium animalis subsp. lactis strain AD011, Bifidobacterium lactis AD011
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