STRINGSTRING
GM18_0325 GM18_0325 GM18_0977 GM18_0977 GM18_1313 GM18_1313 GM18_1840 GM18_1840 GM18_3997 GM18_3997 GM18_4519 GM18_4519
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GM18_0325KEGG: nve:NEMVE_v1g200895 hypothetical protein. (175 aa)
GM18_0977KEGG: mlo:mlr0587 hypothetical protein. (1466 aa)
GM18_1313KEGG: nve:NEMVE_v1g19000 hypothetical protein. (113 aa)
GM18_1840KEGG: nve:NEMVE_v1g123560 hypothetical protein. (165 aa)
GM18_3997PFAM: Ryanodine receptor Ryr; KEGG: bth:BT_2247 putative ryanodine receptor. (94 aa)
GM18_4519KEGG: nve:NEMVE_v1g156287 hypothetical protein. (109 aa)
Your Current Organism:
Geobacter sp. M18
NCBI taxonomy Id: 443143
Other names: G. sp. M18
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