STRINGSTRING
GM21_1519 GM21_1519 GM21_1520 GM21_1520 GM21_1521 GM21_1521 GM21_1522 GM21_1522 GM21_1523 GM21_1523 GM21_1775 GM21_1775
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GM21_1519PFAM: peptidase U62 modulator of DNA gyrase; KEGG: gbm:Gbem_2721 peptidase U62 modulator of DNA gyrase. (460 aa)
GM21_1520KEGG: gbm:Gbem_2720 hypothetical protein. (87 aa)
GM21_1521TIGRFAM: conserved repeat domain protein; KEGG: gbm:Gbem_2719 conserved repeat domain protein. (435 aa)
GM21_1522TIGRFAM: conserved repeat domain protein; PFAM: OmpA/MotB domain protein; protein of unknown function DUF11; KEGG: gbm:Gbem_2718 conserved repeat domain protein. (1984 aa)
GM21_1523KEGG: gbm:Gbem_2717 hypothetical protein. (412 aa)
GM21_1775PFAM: peptidase U62 modulator of DNA gyrase; KEGG: gbm:Gbem_2442 peptidase U62 modulator of DNA gyrase. (446 aa)
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.