STRINGSTRING
GM21_1073 GM21_1073 GM21_4116 GM21_4116 nuoA-2 nuoA-2 nuoB nuoB nuoC-2 nuoC-2 GM21_4004 GM21_4004 GM21_4001 GM21_4001 GM21_3999 GM21_3999 GM21_3998 GM21_3998 nuoN-2 nuoN-2 GM21_3986 GM21_3986 GM21_3173 GM21_3173 GM21_3040 GM21_3040 GM21_3034 GM21_3034 GM21_2851 GM21_2851 GM21_2803 GM21_2803 GM21_1074 GM21_1074 GM21_1072 GM21_1072 GM21_1069 GM21_1069 GM21_1065 GM21_1065 GM21_0673 GM21_0673 nuoA nuoA nuoC nuoC GM21_0158 GM21_0158 GM21_0153 GM21_0153 GM21_0151 GM21_0151 GM21_0150 GM21_0150 nuoN nuoN GM21_0102 GM21_0102 GM21_0045 GM21_0045 GM21_0043 GM21_0043 GM21_0042 GM21_0042
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GM21_1073PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: gbm:Gbem_3188 NADH-ubiquinone oxidoreductase chain 49kDa. (503 aa)
GM21_4116PFAM: Rieske [2Fe-2S] domain protein; KEGG: gbm:Gbem_4025 Rieske (2Fe-2S) domain protein. (130 aa)
nuoA-2NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (118 aa)
nuoBNADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (170 aa)
nuoC-2NADH (or F420H2) dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (161 aa)
GM21_4004PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: gbm:Gbem_3920 molybdopterin oxidoreductase. (821 aa)
GM21_4001NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (167 aa)
GM21_3999KEGG: gbm:Gbem_3915 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein. (667 aa)
GM21_3998KEGG: gbm:Gbem_3914 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (535 aa)
nuoN-2Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (484 aa)
GM21_3986KEGG: gbm:Gbem_3901 nitric oxide reductase. (762 aa)
GM21_3173PFAM: Rieske [2Fe-2S] domain protein; Cytochrome b6-f complex Fe-S subunit; KEGG: gsu:GSU1650 cytochrome b/b6 complex, iron-sulfur subunit. (139 aa)
GM21_3040PFAM: cytochrome c oxidase subunit I; KEGG: gbm:Gbem_1237 cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (467 aa)
GM21_3034Nitric-oxide reductase; PFAM: cytochrome c oxidase subunit I; KEGG: gbm:Gbem_1248 cytochrome c oxidase subunit I. (457 aa)
GM21_2851PFAM: Rieske [2Fe-2S] domain protein; KEGG: gme:Gmet_2121 twin-arginine translocation pathway signal. (167 aa)
GM21_2803PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_1451 ferredoxin. (214 aa)
GM21_1074PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_3187 NADH ubiquinone oxidoreductase 20 kDa subunit. (252 aa)
GM21_1072PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: gbm:Gbem_3189 NADH/ubiquinone/plastoquinone (complex I). (477 aa)
GM21_1069PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: gbm:Gbem_3193 NADH/ubiquinone/plastoquinone (complex I). (659 aa)
GM21_1065PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: gbm:Gbem_3197 NADH/ubiquinone/plastoquinone (complex I). (666 aa)
GM21_0673PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: gbm:Gbem_0660 molybdopterin oxidoreductase. (822 aa)
nuoANADH-ubiquinone/plastoquinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (134 aa)
nuoCNADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. In the C-terminal section; belongs to the complex I 49 kDa subunit family. (794 aa)
GM21_0158PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: gbm:Gbem_0176 respiratory-chain NADH dehydrogenase domain 51 kDa subunit. (421 aa)
GM21_0153NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (160 aa)
GM21_0151TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; KEGG: gbm:Gbem_0169 proton-translocating NADH-quinone oxidoreductase, chain L. (623 aa)
GM21_0150TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: gbm:Gbem_0168 proton-translocating NADH-quinone oxidoreductase, chain M. (495 aa)
nuoNProton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (463 aa)
GM21_0102PFAM: cytochrome c oxidase subunit I; KEGG: gbm:Gbem_0121 cytochrome c oxidase subunit I. (463 aa)
GM21_0045Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (300 aa)
GM21_0043PFAM: cytochrome c oxidase subunit III; KEGG: gbm:Gbem_0044 cytochrome c oxidase subunit III. (199 aa)
GM21_0042KEGG: gbm:Gbem_0043 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (542 aa)
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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