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| | GM21_2795 | PFAM: amidohydrolase 2; KEGG: gbm:Gbem_1458 amidohydrolase 2. (302 aa) |
| | hemE | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. (339 aa) |
| | hemH | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (317 aa) |
| | GM21_0209 | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. (912 aa) |
| | GM21_0215 | TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: gbm:Gbem_0231 UbiD family decarboxylase; Belongs to the UbiD family. (448 aa) |
| | GM21_0258 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1148 aa) |
| | GM21_0280 | Adenylate/guanylate cyclase with Chase sensor; PFAM: CHASE2 domain protein; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: gbm:Gbem_0296 adenylate/guanylate cyclase with CHASE sensor. (656 aa) |
| | GM21_0286 | PFAM: amidohydrolase 2; KEGG: gbm:Gbem_0303 amidohydrolase 2. (330 aa) |
| | GM21_0316 | Methylmalonyl-CoA carboxytransferase; PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; KEGG: gbm:Gbem_0334 conserved carboxylase domain protein. (501 aa) |
| | GM21_0332 | TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; aminotransferase class IV; KEGG: gur:Gura_0607 para-aminobenzoate synthase, subunit I. (573 aa) |
| | GM21_0387 | PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: gbm:Gbem_0393 2-hydroxyglutaryl-CoA dehydratase D-component. (327 aa) |
| | GM21_0405 | TIGRFAM: siroheme synthase; KEGG: gbm:Gbem_0405 siroheme synthase. (224 aa) |
| | GM21_0409 | TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: gbm:Gbem_0409 uroporphyrin-III C-methyltransferase. (511 aa) |
| | GM21_0410 | Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: gbm:Gbem_0410 delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (339 aa) |
| | GM21_0562 | PFAM: ThiJ/PfpI domain protein; KEGG: gbm:Gbem_0550 ThiJ/PfpI domain protein. (218 aa) |
| | GM21_0571 | TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gbm:Gbem_0558 methylmalonyl-CoA epimerase. (137 aa) |
| | GM21_0585 | KEGG: gbm:Gbem_0572 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV. (356 aa) |
| | mqnD | Protein of unknown function DUF191; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily. (288 aa) |
| | rlpA | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (157 aa) |
| | GM21_0620 | PFAM: protein of unknown function UPF0047; KEGG: gbm:Gbem_0606 protein of unknown function UPF0047. (132 aa) |
| | tal | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. (214 aa) |
| | mltG | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. (327 aa) |
| | GM21_0725 | PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: gbm:Gbem_0713 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (668 aa) |
| | pckA | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (529 aa) |
| | pckG | Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. (647 aa) |
| | trpA | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (267 aa) |
| | GM21_0899 | TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: gbm:Gbem_3346 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (355 aa) |
| | GM21_0906 | PFAM: class II aldolase/adducin family protein; KEGG: gbm:Gbem_3340 class II aldolase/adducin family protein. (385 aa) |
| | trpB | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (396 aa) |
| | GM21_0990 | TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; Chorismate mutase; KEGG: gbm:Gbem_3260 chorismate mutase. (359 aa) |
| | GM21_1193 | TIGRFAM: cytochrome C family protein; KEGG: gbm:Gbem_3057 cytochrome c family protein. (1018 aa) |
| | GM21_1198 | TIGRFAM: cytochrome C family protein; KEGG: gbm:Gbem_3052 cytochrome c family protein. (1143 aa) |
| | GM21_1219 | KEGG: gbm:Gbem_3032 hypothetical protein. (247 aa) |
| | ribBA | GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. (400 aa) |
| | panD | Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (134 aa) |
| | GM21_1308 | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. (384 aa) |
| | speA | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. (635 aa) |
| | pyrF | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. (240 aa) |
| | GM21_1355 | PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gbm:Gbem_2859 Orn/DAP/Arg decarboxylase 2. (421 aa) |
| | GM21_1401 | TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: gbm:Gbem_2809 YbaK/EbsC protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (160 aa) |
| | GM21_1408 | KEGG: gbm:Gbem_2802 hypothetical protein. (427 aa) |
| | GM21_1415 | PFAM: fumarate lyase; KEGG: gbm:Gbem_2795 fumarate lyase. (466 aa) |
| | GM21_1434 | PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: geo:Geob_2730 cytochrome c biogenesis protein transmembrane region. (249 aa) |
| | ilvD | KEGG: gbm:Gbem_2747 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family. (553 aa) |
| | psd | Phosphatidylserine decarboxylase related protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). (219 aa) |
| | leuC | Homoaconitate hydratase family protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (427 aa) |
| | GM21_1505 | PFAM: aconitate hydratase domain protein; KEGG: gbm:Gbem_2736 aconitate hydratase domain protein; Belongs to the LeuD family. (175 aa) |
| | GM21_1509 | KEGG: gbm:Gbem_2732 hypothetical protein. (296 aa) |
| | GM21_1579 | TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: gbm:Gbem_2656 carboxylyase-related protein; Belongs to the UbiD family. (613 aa) |
| | dacA | Protein of unknown function DUF147; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (252 aa) |
| | GM21_1761 | PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gbm:Gbem_2456 radical SAM domain protein. (337 aa) |
| | trpE | Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...] (491 aa) |
| | GM21_1879 | PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: glo:Glov_1186 cytochrome c biogenesis protein transmembrane region. (228 aa) |
| | GM21_1887 | TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: gbm:Gbem_2333 adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (431 aa) |
| | GM21_1914 | DNA-(apurinic or apyrimidinic site) lyase; KEGG: gbm:Gbem_2309 HhH-GPD family protein; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; iron-sulfur cluster loop. (220 aa) |
| | GM21_1937 | PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; polysaccharide biosynthesis protein CapD; KEGG: gbm:Gbem_2286 NAD-dependent epimerase/dehydratase. (311 aa) |
| | moaC | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. (158 aa) |
| | moaA | Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (326 aa) |
| | GM21_1966 | TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain protein; KEGG: gbm:Gbem_2258 aconitate hydratase. (648 aa) |
| | GM21_2019 | KEGG: gbm:Gbem_2208 hypothetical protein. (375 aa) |
| | GM21_2050 | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (934 aa) |
| | GM21_2084 | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (271 aa) |
| | GM21_2092 | PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: gbm:Gbem_2126 3-hydroxyacyl-CoA dehydrogenase NAD-binding. (789 aa) |
| | trpB-2 | Pyridoxal-phosphate dependent TrpB-like enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (451 aa) |
| | trpC | PFAM: Indole-3-glycerol phosphate synthase; KEGG: gbm:Gbem_1957 indole-3-glycerol phosphate synthase; Belongs to the TrpC family. (266 aa) |
| | GM21_2261 | TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: gbm:Gbem_1955 glutamine amidotransferase of anthranilate synthase. (189 aa) |
| | GM21_2289 | Threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. (353 aa) |
| | GM21_2321 | PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: gbm:Gbem_1888 malic protein. (749 aa) |
| | GM21_2322 | PFAM: carbonic anhydrase; KEGG: gbm:Gbem_1887 carbonic anhydrase. (180 aa) |
| | GM21_2337 | PFAM: Lytic transglycosylase catalytic; KEGG: gbm:Gbem_1873 lytic transglycosylase catalytic protein. (204 aa) |
| | GM21_2404 | KEGG: ppd:Ppro_0225 hypothetical protein. (151 aa) |
| | GM21_2434 | PFAM: 3-dehydroquinate synthase; KEGG: gbm:Gbem_1816 3-dehydroquinate synthase. (402 aa) |
| | GM21_2449 | PFAM: VanZ family protein; KEGG: gbm:Gbem_1801 VanZ family protein. (403 aa) |
| | GM21_2538 | PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KR domain protein; short-chain dehydrogenase/reductase SDR; KEGG: gbm:Gbem_1683 NAD-dependent epimerase/dehydratase. (373 aa) |
| | GM21_2546 | Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (411 aa) |
| | GM21_2582 | PFAM: polysaccharide biosynthesis protein CapD; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KR domain protein; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: gbm:Gbem_1633 polysaccharide biosynthesis protein CapD. (647 aa) |
| | gmd | NAD-dependent epimerase/dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (320 aa) |
| | gmd-2 | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (372 aa) |
| | mqnA | Protein of unknown function DUF178; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). (273 aa) |
| | aroQ | 3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. (149 aa) |
| | aroB | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. (362 aa) |
| | aroC | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (393 aa) |
| | ribBA-2 | GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. (400 aa) |
| | GM21_2796 | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gbm:Gbem_1457 enoyl-CoA hydratase/isomerase. (287 aa) |
| | GM21_2798 | Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; malic protein NAD-binding; malic protein domain protein; KEGG: gbm:Gbem_1455 malic protein. (780 aa) |
| | GM21_2799 | TIGRFAM: oxaloacetate decarboxylase alpha subunit; PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; biotin/lipoyl attachment domain-containing protein; KEGG: gbm:Gbem_1454 oxaloacetate decarboxylase alpha subunit. (690 aa) |
| | moaA-2 | Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (326 aa) |
| | GM21_2867 | Benzoyl-CoA reductase; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: gbm:Gbem_1413 2-hydroxyglutaryl-CoA dehydratase D-component. (415 aa) |
| | moaA-3 | Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (326 aa) |
| | moaC-2 | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. (158 aa) |
| | GM21_2959 | Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase; PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: gbm:Gbem_1324 malic protein. (749 aa) |
| | queE | Radical SAM domain protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (251 aa) |
| | GM21_2966 | PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: gbm:Gbem_1317 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. (122 aa) |
| | GM21_2985 | KEGG: gbm:Gbem_1298 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit. (458 aa) |
| | GM21_2989 | TIGRFAM: aconitate hydratase 2; PFAM: Aconitase B, N-terminal; aconitate hydratase domain protein; KEGG: gbm:Gbem_1294 aconitate hydratase 2; Belongs to the aconitase/IPM isomerase family. (839 aa) |
| | nnrE | Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] (520 aa) |
| | GM21_3139 | PFAM: carbonic anhydrase; KEGG: gbm:Gbem_1148 carbonic anhydrase. (230 aa) |
| | gmd-3 | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (379 aa) |
| | GM21_3240 | PFAM: ThiJ/PfpI domain protein; KEGG: gbm:Gbem_1020 ThiJ/PfpI domain protein. (233 aa) |
| | GM21_3253 | PFAM: ketose-bisphosphate aldolase class-II; KEGG: gbm:Gbem_1007 fructose/tagatose bisphosphate aldolase-like protein. (427 aa) |
| | eno | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (429 aa) |
| | dacA-2 | Protein of unknown function DUF147; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (388 aa) |
| | GM21_3371 | Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (541 aa) |
| | GM21_3403 | PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: gbm:Gbem_0861 NAD-dependent epimerase/dehydratase. (336 aa) |
| | fabZ | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (144 aa) |
| | aroC-2 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (360 aa) |
| | GM21_3446 | PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; KEGG: gbm:Gbem_0815 formamidopyrimidine-DNA glycolase, H2TH DNA binding. (261 aa) |
| | GM21_3473 | PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: gbm:Gbem_3411 cytochrome c biogenesis protein transmembrane region. (238 aa) |
| | GM21_3480 | Threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class V; KEGG: gbm:Gbem_3418 aromatic amino acid beta-eliminating lyase/threonine aldolase. (339 aa) |
| | GM21_3511 | UDP-glucose 4-epimerase; PFAM: polysaccharide biosynthesis protein CapD; Polysaccharide biosynthesis domain protein; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: geo:Geob_1458 polysaccharide biosynthesis protein CapD. (336 aa) |
| | thiC | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. (437 aa) |
| | GM21_3542 | TIGRFAM: cytochrome C family protein; KEGG: gbm:Gbem_1154 cytochrome c family protein. (1453 aa) |
| | GM21_3543 | TIGRFAM: cytochrome C family protein; KEGG: gbm:Gbem_1153 cytochrome c family protein. (957 aa) |
| | GM21_3563 | TIGRFAM: cytochrome C family protein; KEGG: gur:Gura_0076 cytochrome c family protein. (1276 aa) |
| | GM21_3564 | TIGRFAM: cytochrome C family protein; KEGG: gbm:Gbem_1153 cytochrome c family protein. (955 aa) |
| | GM21_3603 | TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: gbm:Gbem_3537 L-threonine-O-3-phosphate decarboxylase. (370 aa) |
| | cobD | Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (319 aa) |
| | GM21_3612 | PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: gbm:Gbem_3546 cobalamin (vitamin B12) biosynthesis CbiX protein. (127 aa) |
| | GM21_3615 | KEGG: gbm:Gbem_3549 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA. (341 aa) |
| | GM21_3731 | PFAM: protein of unknown function DUF111; KEGG: gbm:Gbem_3626 protein of unknown function DUF111; Belongs to the LarC family. (385 aa) |
| | argH | TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: gbm:Gbem_3641 argininosuccinate lyase. (458 aa) |
| | GM21_3784 | TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: gbm:Gbem_3689 threonine dehydratase. (402 aa) |
| | hisF | Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. (252 aa) |
| | hisH | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (207 aa) |
| | hisB | PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: gbm:Gbem_3703 imidazoleglycerol-phosphate dehydratase. (195 aa) |
| | ispF | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). (162 aa) |
| | GM21_3893 | TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: gbm:Gbem_3809 thiamine biosynthesis protein ThiC. (435 aa) |
| | GM21_3943 | KEGG: gbm:Gbem_3858 citrate lyase, alpha subunit; TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit. (512 aa) |
| | GM21_3944 | Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; KEGG: gbm:Gbem_3859 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. (306 aa) |
| | GM21_3955 | Carbonate dehydratase; PFAM: carbonic anhydrase; KEGG: gbm:Gbem_3868 carbonic anhydrase. (195 aa) |
| | GM21_4023 | PFAM: Lytic transglycosylase catalytic; KEGG: gbm:Gbem_3939 lytic transglycosylase catalytic protein. (260 aa) |
| | GM21_4094 | PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: gbm:Gbem_3999 PBS lyase heat domain protein repeat-containing protein. (522 aa) |
| | dapA | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (290 aa) |
| | lysA | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (417 aa) |
