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GM21_0080 GM21_0080 GM21_0473 GM21_0473 GM21_0474 GM21_0474 murB murB GM21_0521 GM21_0521 GM21_0556 GM21_0556 GM21_0577 GM21_0577 GM21_0654 GM21_0654 GM21_0718 GM21_0718 GM21_0871 GM21_0871 GM21_0913 GM21_0913 GM21_0967 GM21_0967 murB-2 murB-2 GM21_1319 GM21_1319 GM21_1381 GM21_1381 GM21_1384 GM21_1384 GM21_1386 GM21_1386 GM21_1403 GM21_1403 GM21_1515 GM21_1515 trmFO trmFO GM21_1743 GM21_1743 pyrK pyrK GM21_2089 GM21_2089 GM21_2132 GM21_2132 murB-3 murB-3 GM21_2715 GM21_2715 GM21_2783 GM21_2783 GM21_2786 GM21_2786 GM21_2801 GM21_2801 GM21_2837 GM21_2837 GM21_2846 GM21_2846 GM21_2847 GM21_2847 GM21_2927 GM21_2927 GM21_2949 GM21_2949 GM21_3260 GM21_3260 GM21_3566 GM21_3566 thyX thyX GM21_3857 GM21_3857 mnmG mnmG GM21_0284 GM21_0284
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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from curated databases
experimentally determined
Predicted Interactions
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textmining
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GM21_0080Dihydrouridine synthase DuS; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (341 aa)
GM21_0473PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: gbm:Gbem_0457 pyridine nucleotide-disulphide oxidoreductase dimerisation region. (507 aa)
GM21_0474PFAM: SNARE associated Golgi protein; KEGG: gbm:Gbem_0458 SNARE associated Golgi protein. (224 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (300 aa)
GM21_0521PFAM: NADPH-dependent FMN reductase; KEGG: gur:Gura_3523 NADPH-dependent FMN reductase. (217 aa)
GM21_0556PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gbm:Gbem_0543 acyl-CoA dehydrogenase domain protein. (381 aa)
GM21_0577PFAM: FAD linked oxidase domain protein; KEGG: gbm:Gbem_0564 FAD linked oxidase domain protein. (459 aa)
GM21_0654TIGRFAM: mercuric reductase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gbm:Gbem_0640 mercuric reductase. (468 aa)
GM21_0718TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: gme:Gmet_2764 dihydrolipoamide dehydrogenase. (470 aa)
GM21_0871PFAM: FAD dependent oxidoreductase; KEGG: gbm:Gbem_3375 FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (537 aa)
GM21_0913KEGG: gbm:Gbem_3333 succinate dehydrogenase or fumarate reductase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (637 aa)
GM21_0967PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: gbm:Gbem_3282 protein of unknown function DUF21. (439 aa)
murB-2UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (327 aa)
GM21_1319PFAM: FAD linked oxidase domain protein; KEGG: gbm:Gbem_2906 FAD linked oxidase domain protein. (457 aa)
GM21_1381PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gbm:Gbem_2832 acyl-CoA dehydrogenase domain protein. (379 aa)
GM21_1384PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: gbm:Gbem_2829 electron transfer flavoprotein alpha subunit. (305 aa)
GM21_1386PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gbm:Gbem_2826 acyl-CoA dehydrogenase domain protein. (385 aa)
GM21_1403TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (321 aa)
GM21_1515PFAM: SNARE associated Golgi protein; KEGG: gbm:Gbem_2726 SNARE associated Golgi protein. (220 aa)
trmFOGid protein; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. (435 aa)
GM21_1743PFAM: NADPH-dependent FMN reductase; KEGG: gbm:Gbem_2476 NADPH-dependent FMN reductase. (214 aa)
pyrKOxidoreductase FAD/NAD(P)-binding domain protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). (269 aa)
GM21_2089PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gbm:Gbem_2128 acyl-CoA dehydrogenase domain protein. (592 aa)
GM21_2132PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_2086 electron transfer flavoprotein alpha subunit. (436 aa)
murB-3UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (333 aa)
GM21_2715PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_1501 electron transfer flavoprotein alpha subunit. (439 aa)
GM21_2783PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: gbm:Gbem_1470 electron transfer flavoprotein alpha subunit. (302 aa)
GM21_2786PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_1467 electron transfer flavoprotein alpha subunit. (447 aa)
GM21_2801PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gbm:Gbem_1452 acyl-CoA dehydrogenase domain protein. (385 aa)
GM21_2837PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: gme:Gmet_2134 molybdopterin dehydrogenase, FAD-binding:CO dehydrogenase flavoprotein-like. (288 aa)
GM21_2846PFAM: FAD linked oxidase domain protein; KEGG: geo:Geob_0118 FAD linked oxidase domain protein. (518 aa)
GM21_2847PFAM: FAD linked oxidase domain protein; KEGG: geo:Geob_0119 FAD linked oxidase domain protein. (527 aa)
GM21_2927PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_1358 electron transfer flavoprotein alpha subunit. (452 aa)
GM21_2949PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: gbm:Gbem_1334 electron transfer flavoprotein alpha subunit. (303 aa)
GM21_3260PFAM: CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: gbm:Gbem_1000 CBS domain containing protein. (287 aa)
GM21_3566PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: gme:Gmet_1896 dihydrolipoamide dehydrogenase. (452 aa)
thyXThymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. (229 aa)
GM21_3857PFAM: NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone); KEGG: gbm:Gbem_3773 NADPH-dependent FMN reductase. (220 aa)
mnmGGlucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. (624 aa)
GM21_0284PFAM: NADPH-dependent FMN reductase; KEGG: gbm:Gbem_0301 NADPH-dependent FMN reductase. (211 aa)
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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