STRINGSTRING
GM21_3592 GM21_3592 GM21_1747 GM21_1747 GM21_0979 GM21_0979 GM21_2651 GM21_2651 GM21_3746 GM21_3746 GM21_3624 GM21_3624
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GM21_3592PFAM: NUDIX hydrolase; KEGG: gbm:Gbem_3526 NUDIX hydrolase. (177 aa)
GM21_1747NAD(+) diphosphatase; PFAM: NUDIX hydrolase; NADH pyrophosphatase-like; Zinc ribbon NADH pyrophosphatase; KEGG: gbm:Gbem_2470 NUDIX hydrolase; Belongs to the Nudix hydrolase family. (282 aa)
GM21_0979PFAM: NUDIX hydrolase; KEGG: gbm:Gbem_3270 NUDIX hydrolase; Belongs to the Nudix hydrolase family. (147 aa)
GM21_2651PFAM: NUDIX hydrolase; KEGG: gbm:Gbem_1565 NUDIX hydrolase. (150 aa)
GM21_3746PFAM: NUDIX hydrolase; KEGG: gbm:Gbem_3639 NUDIX hydrolase; Belongs to the Nudix hydrolase family. (142 aa)
GM21_3624PFAM: NUDIX hydrolase; KEGG: gbm:Gbem_3558 NUDIX hydrolase. (173 aa)
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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