STRINGSTRING
GM21_2536 GM21_2536 GM21_3120 GM21_3120 tdh tdh GM21_0122 GM21_0122 GM21_0400 GM21_0400 GM21_2823 GM21_2823
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GM21_2536PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: geo:Geob_3242 alcohol dehydrogenase GroES domain protein. (323 aa)
GM21_3120PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: gbm:Gbem_1174 alcohol dehydrogenase GroES domain protein. (410 aa)
tdhL-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. (347 aa)
GM21_0122PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: gbm:Gbem_0139 alcohol dehydrogenase GroES domain protein. (401 aa)
GM21_0400PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gbm:Gbem_0401 alcohol dehydrogenase zinc-binding domain protein. (352 aa)
GM21_2823TIGRFAM: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: gbm:Gbem_1431 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. (357 aa)
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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