STRINGSTRING
GM21_0120 GM21_0120 GM21_0121 GM21_0121 GM21_0273 GM21_0273 GM21_1156 GM21_1156 GM21_1266 GM21_1266 GM21_1396 GM21_1396 GM21_1726 GM21_1726 GM21_1857 GM21_1857 GM21_1963 GM21_1963 GM21_2296 GM21_2296 GM21_2821 GM21_2821 GM21_2843 GM21_2843 GM21_3729 GM21_3729
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GM21_0120PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mxa:MXAN_1405 short chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (354 aa)
GM21_0121PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gbm:Gbem_0138 short-chain dehydrogenase/reductase SDR. (286 aa)
GM21_0273PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gbm:Gbem_0291 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (334 aa)
GM21_11563-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (246 aa)
GM21_1266PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gbm:Gbem_2959 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (280 aa)
GM21_1396PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gbm:Gbem_2814 short-chain dehydrogenase/reductase SDR. (256 aa)
GM21_1726PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gbm:Gbem_2493 short-chain dehydrogenase/reductase SDR. (200 aa)
GM21_1857PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: gbm:Gbem_2361 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (245 aa)
GM21_1963PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: gbm:Gbem_2261 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (254 aa)
GM21_2296PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sfu:Sfum_3431 short-chain dehydrogenase/reductase SDR. (238 aa)
GM21_2821PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: gbm:Gbem_1433 short-chain dehydrogenase/reductase SDR. (237 aa)
GM21_2843PFAM: short-chain dehydrogenase/reductase SDR; KEGG: geo:Geob_0114 short-chain dehydrogenase/reductase SDR. (255 aa)
GM21_3729PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pca:Pcar_1364 putative glucose/ribitol dehydrogenase. (249 aa)
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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