STRINGSTRING
GM21_1384 GM21_1384 GM21_2132 GM21_2132 GM21_2715 GM21_2715 GM21_2783 GM21_2783 GM21_2786 GM21_2786 GM21_2927 GM21_2927 GM21_2949 GM21_2949
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GM21_1384PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: gbm:Gbem_2829 electron transfer flavoprotein alpha subunit. (305 aa)
GM21_2132PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_2086 electron transfer flavoprotein alpha subunit. (436 aa)
GM21_2715PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_1501 electron transfer flavoprotein alpha subunit. (439 aa)
GM21_2783PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: gbm:Gbem_1470 electron transfer flavoprotein alpha subunit. (302 aa)
GM21_2786PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_1467 electron transfer flavoprotein alpha subunit. (447 aa)
GM21_2927PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_1358 electron transfer flavoprotein alpha subunit. (452 aa)
GM21_2949PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: gbm:Gbem_1334 electron transfer flavoprotein alpha subunit. (303 aa)
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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