STRINGSTRING
GM21_2461 GM21_2461 GM21_4137 GM21_4137 GM21_3820 GM21_3820 GM21_3171 GM21_3171 GM21_2309 GM21_2309 GM21_2167 GM21_2167 mqnC mqnC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GM21_2461PFAM: Radical SAM domain protein; KEGG: gbm:Gbem_1786 radical SAM domain protein. (380 aa)
GM21_4137PFAM: Radical SAM domain protein; KEGG: gbm:Gbem_4047 radical SAM domain protein. (430 aa)
GM21_3820PFAM: Radical SAM domain protein; Methyltransferase type 11; KEGG: met:M446_4900 radical SAM domain-containing protein. (515 aa)
GM21_3171PFAM: Radical SAM domain protein; KEGG: gbm:Gbem_1091 radical SAM domain protein. (319 aa)
GM21_2309PFAM: Radical SAM domain protein; KEGG: gbm:Gbem_1899 radical SAM domain protein. (302 aa)
GM21_2167TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; Radical SAM domain protein; KEGG: gbm:Gbem_2050 hydrolase, TatD family. (458 aa)
mqnCRadical SAM domain protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). (357 aa)
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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