16 items (Erythrura gouldiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RAB31	MSP domain-containing protein. (382 aa)
	OSBPL1A	Oxysterol-binding protein; Belongs to the OSBP family. (953 aa)
	STARD3NL	MENTAL domain-containing protein. (234 aa)
	DV515_00006410	Uncharacterized protein. (231 aa)
	PDZD8	Uncharacterized protein. (1004 aa)
	CERT1	Uncharacterized protein. (624 aa)
	MOSPD2	Uncharacterized protein. (518 aa)
	STARD3	Uncharacterized protein. (442 aa)
	ZFYVE27	Uncharacterized protein. (408 aa)
	DV515_00015593	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone. (283 aa)
	OSBP2	Oxysterol-binding protein; Belongs to the OSBP family. (822 aa)
	OSBP	Oxysterol-binding protein; Belongs to the OSBP family. (682 aa)
	MOSPD1	MSP domain-containing protein. (231 aa)
	DV515_00016997	Uncharacterized protein. (915 aa)
	STARD4	StAR related lipid transfer domain containing 4. (188 aa)
	VAPB	MSP domain-containing protein. (253 aa)

Your Current Organism:

Erythrura gouldiae

NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CERT1	DV515_00015593	ENSEGOP00005006952	ENSEGOP00005014889	Uncharacterized protein.	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	0.450
CERT1	MOSPD1	ENSEGOP00005006952	ENSEGOP00005020765	Uncharacterized protein.	MSP domain-containing protein.	0.427
CERT1	RAB31	ENSEGOP00005006952	ENSEGOP00005000177	Uncharacterized protein.	MSP domain-containing protein.	0.722
CERT1	STARD3	ENSEGOP00005006952	ENSEGOP00005010174	Uncharacterized protein.	Uncharacterized protein.	0.617
CERT1	VAPB	ENSEGOP00005006952	ENSEGOP00005022962	Uncharacterized protein.	MSP domain-containing protein.	0.596
DV515_00006410	MOSPD1	ENSEGOP00005004756	ENSEGOP00005020765	Uncharacterized protein.	MSP domain-containing protein.	0.519
DV515_00015593	CERT1	ENSEGOP00005014889	ENSEGOP00005006952	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	Uncharacterized protein.	0.450
DV515_00015593	MOSPD1	ENSEGOP00005014889	ENSEGOP00005020765	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	MSP domain-containing protein.	0.464
DV515_00015593	RAB31	ENSEGOP00005014889	ENSEGOP00005000177	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	MSP domain-containing protein.	0.465
DV515_00015593	STARD3	ENSEGOP00005014889	ENSEGOP00005010174	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	Uncharacterized protein.	0.732
DV515_00015593	STARD3NL	ENSEGOP00005014889	ENSEGOP00005003567	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	MENTAL domain-containing protein.	0.944
DV515_00015593	STARD4	ENSEGOP00005014889	ENSEGOP00005021969	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	StAR related lipid transfer domain containing 4.	0.600
DV515_00015593	VAPB	ENSEGOP00005014889	ENSEGOP00005022962	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	MSP domain-containing protein.	0.464
DV515_00016997	MOSPD1	ENSEGOP00005021103	ENSEGOP00005020765	Uncharacterized protein.	MSP domain-containing protein.	0.513
DV515_00016997	RAB31	ENSEGOP00005021103	ENSEGOP00005000177	Uncharacterized protein.	MSP domain-containing protein.	0.558
DV515_00016997	VAPB	ENSEGOP00005021103	ENSEGOP00005022962	Uncharacterized protein.	MSP domain-containing protein.	0.558
MOSPD1	CERT1	ENSEGOP00005020765	ENSEGOP00005006952	MSP domain-containing protein.	Uncharacterized protein.	0.427
MOSPD1	DV515_00006410	ENSEGOP00005020765	ENSEGOP00005004756	MSP domain-containing protein.	Uncharacterized protein.	0.519
MOSPD1	DV515_00015593	ENSEGOP00005020765	ENSEGOP00005014889	MSP domain-containing protein.	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	0.464
MOSPD1	DV515_00016997	ENSEGOP00005020765	ENSEGOP00005021103	MSP domain-containing protein.	Uncharacterized protein.	0.513