53 items (Erythrura gouldiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LRRC1	Uncharacterized protein. (645 aa)
	SNX4	PX domain-containing protein. (442 aa)
	ENTR1	Uncharacterized protein. (300 aa)
	WASHC1	WH2 domain-containing protein. (476 aa)
	VPS35L	VPS35 endosomal protein sorting factor like. (1023 aa)
	VPS26C	Uncharacterized protein. (278 aa)
	MICALL2	Uncharacterized protein. (797 aa)
	RAB7A	Uncharacterized protein. (207 aa)
	GRIP2	Uncharacterized protein. (1097 aa)
	ARF6	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (147 aa)
	RAB11FIP4	FIP-RBD domain-containing protein. (630 aa)
	RAB8A	Uncharacterized protein. (219 aa)
	DV515_00015291	Uncharacterized protein. (216 aa)
	SNF8	Uncharacterized protein. (141 aa)
	SCRIB	Uncharacterized protein. (1561 aa)
	MICALL1	Uncharacterized protein. (938 aa)
	DV515_00004386	Uncharacterized protein. (459 aa)
	SNX12	PX domain-containing protein. (162 aa)
	EPG5	Uncharacterized protein. (2578 aa)
	DV515_00009942	Uncharacterized protein. (682 aa)
	ENSEGOP00005014884	annotation not available (78 aa)
	VPS29	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (194 aa)
	DENND1A	Uncharacterized protein. (1056 aa)
	RAB14	Uncharacterized protein. (249 aa)
	HGS	Uncharacterized protein. (804 aa)
	RAB11FIP3	Uncharacterized protein. (707 aa)
	GRIP1	Uncharacterized protein. (1153 aa)
	ANKRD27	Uncharacterized protein. (1054 aa)
	VPS35	Uncharacterized protein. (767 aa)
	ACAP2	Uncharacterized protein. (787 aa)
	VPS51	Uncharacterized protein. (782 aa)
	VPS26A	Uncharacterized protein. (374 aa)
	VPS53	Vps53_N domain-containing protein. (832 aa)
	SNX17	Uncharacterized protein. (429 aa)
	SNX30	Sorting nexin family member 30. (443 aa)
	DV515_00016542	Uncharacterized protein. (218 aa)
	SNX27	Uncharacterized protein. (375 aa)
	ENSEGOP00005022056	annotation not available (49 aa)
	ANKRD50	ANK_REP_REGION domain-containing protein. (1417 aa)
	RAB15	Uncharacterized protein. (203 aa)
	RAB35	Uncharacterized protein. (201 aa)
	RAB11A	Uncharacterized protein. (216 aa)
	SNX3	Sorting nexin 3. (162 aa)
	VPS39	CNH domain-containing protein. (875 aa)
	EHD4	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (541 aa)
	STX6	Syntaxin 6. (242 aa)
	EIPR1	WD_REPEATS_REGION domain-containing protein. (387 aa)
	DENND1B	UDENN domain-containing protein. (787 aa)
	SNX7	PX domain-containing protein. (451 aa)
	EHD3	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (535 aa)
	DV515_00001684	Uncharacterized protein. (294 aa)
	VPS50	Vps54_N domain-containing protein. (967 aa)
	NSG1	Uncharacterized protein. (207 aa)

Your Current Organism:

Erythrura gouldiae

NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACAP2	ARF6	ENSEGOP00005017655	ENSEGOP00005009360	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.544
ACAP2	RAB11FIP3	ENSEGOP00005017655	ENSEGOP00005016539	Uncharacterized protein.	Uncharacterized protein.	0.425
ACAP2	RAB11FIP4	ENSEGOP00005017655	ENSEGOP00005009552	Uncharacterized protein.	FIP-RBD domain-containing protein.	0.413
ACAP2	RAB35	ENSEGOP00005017655	ENSEGOP00005005939	Uncharacterized protein.	Uncharacterized protein.	0.890
ANKRD27	VPS29	ENSEGOP00005016758	ENSEGOP00005015443	Uncharacterized protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.895
ANKRD27	VPS35	ENSEGOP00005016758	ENSEGOP00005017173	Uncharacterized protein.	Uncharacterized protein.	0.539
ANKRD50	VPS29	ENSEGOP00005023335	ENSEGOP00005015443	ANK_REP_REGION domain-containing protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.614
ANKRD50	VPS35	ENSEGOP00005023335	ENSEGOP00005017173	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.589
ARF6	ACAP2	ENSEGOP00005009360	ENSEGOP00005017655	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.544
ARF6	DV515_00009942	ENSEGOP00005009360	ENSEGOP00005014878	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.879
ARF6	DV515_00015291	ENSEGOP00005009360	ENSEGOP00005011427	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.420
ARF6	DV515_00016542	ENSEGOP00005009360	ENSEGOP00005020621	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.420
ARF6	EHD3	ENSEGOP00005009360	ENSEGOP00005003622	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.435
ARF6	EHD4	ENSEGOP00005009360	ENSEGOP00005001426	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.435
ARF6	ENSEGOP00005014884	ENSEGOP00005009360	ENSEGOP00005014884	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	annotation not available	0.879
ARF6	RAB11A	ENSEGOP00005009360	ENSEGOP00005005653	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.420
ARF6	RAB11FIP3	ENSEGOP00005009360	ENSEGOP00005016539	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.741
ARF6	RAB11FIP4	ENSEGOP00005009360	ENSEGOP00005009552	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	FIP-RBD domain-containing protein.	0.546
ARF6	RAB35	ENSEGOP00005009360	ENSEGOP00005005939	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.643
DENND1A	DENND1B	ENSEGOP00005015771	ENSEGOP00005005570	Uncharacterized protein.	UDENN domain-containing protein.	0.640