57 items (Erythrura gouldiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APPL2	Uncharacterized protein. (658 aa)
	INPP5B	Rho-GAP domain-containing protein. (755 aa)
	RAB22A	Uncharacterized protein. (194 aa)
	ENSEGOP00005022746	annotation not available (75 aa)
	VAMP3	V-SNARE coiled-coil homology domain-containing protein. (193 aa)
	ENSEGOP00005021266	annotation not available (372 aa)
	DV515_00016542	Uncharacterized protein. (218 aa)
	DV515_00016917	Uncharacterized protein. (110 aa)
	CDC42	Uncharacterized protein. (213 aa)
	PLA2G2A	Phospholipase A(2). (145 aa)
	SYT7	Uncharacterized protein. (682 aa)
	CDC42EP2	CRIB domain-containing protein. (175 aa)
	ANXA11	Annexin. (494 aa)
	MTOR	Serine/threonine-protein kinase TOR. (2322 aa)
	OCRL	Rho-GAP domain-containing protein. (1049 aa)
	RAB14	Uncharacterized protein. (249 aa)
	DV515_00015613	Uncharacterized protein. (1375 aa)
	ENSEGOP00005014919	annotation not available (1338 aa)
	ENSEGOP00005014813	annotation not available (116 aa)
	PIK3C3	Phosphatidylinositol 3-kinase catalytic subunit type 3. (886 aa)
	ATG14	Uncharacterized protein. (410 aa)
	STXBP4	Uncharacterized protein. (722 aa)
	VAMP8	V-SNARE coiled-coil homology domain-containing protein. (75 aa)
	PIKFYVE	Uncharacterized protein. (2125 aa)
	ENSEGOP00005012693	annotation not available (200 aa)
	ENSEGOP00005012652	annotation not available (331 aa)
	DV515_00017596	Uncharacterized protein. (200 aa)
	DV515_00017601	Uncharacterized protein. (198 aa)
	ENSEGOP00005012430	annotation not available (118 aa)
	ENSEGOP00005012246	annotation not available (109 aa)
	VAMP7	Uncharacterized protein; Belongs to the synaptobrevin family. (220 aa)
	ENSEGOP00005011643	annotation not available (120 aa)
	TRIM14	B box-type domain-containing protein. (419 aa)
	DV515_00015291	Uncharacterized protein. (216 aa)
	DV515_00015856	C2 domain-containing protein. (379 aa)
	VPS26B	Uncharacterized protein. (299 aa)
	SYK	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (635 aa)
	LAMP1	Uncharacterized protein. (455 aa)
	RAB20	RAB20, member RAS oncogene family. (235 aa)
	RAB9A	Uncharacterized protein. (201 aa)
	PIP4P2	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (257 aa)
	AMBRA1	Uncharacterized protein. (1299 aa)
	DV515_00000794	Uncharacterized protein. (73 aa)
	RAB39A	Uncharacterized protein. (249 aa)
	RAB38	RAB38, member RAS oncogene family. (212 aa)
	RAB32	RAB32, member RAS oncogene family. (135 aa)
	NOD1	Nucleotide binding oligomerization domain containing 1. (951 aa)
	DV515_00004265	TIR domain-containing protein. (871 aa)
	ENSEGOP00005005518	annotation not available (118 aa)
	STXBP3	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (568 aa)
	RAB11A	Uncharacterized protein. (216 aa)
	UVRAG	Uncharacterized protein. (687 aa)
	STX6	Syntaxin 6. (242 aa)
	SLC11A1	Uncharacterized protein. (538 aa)
	APPL1	Uncharacterized protein. (708 aa)
	DV515_00005757	SERPIN domain-containing protein; Belongs to the serpin family. (408 aa)
	RAB7A	Uncharacterized protein. (207 aa)

Your Current Organism:

Erythrura gouldiae

NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMBRA1	ATG14	ENSEGOP00005001544	ENSEGOP00005014116	Uncharacterized protein.	Uncharacterized protein.	0.786
AMBRA1	PIK3C3	ENSEGOP00005001544	ENSEGOP00005014316	Uncharacterized protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.842
AMBRA1	UVRAG	ENSEGOP00005001544	ENSEGOP00005005997	Uncharacterized protein.	Uncharacterized protein.	0.626
APPL1	APPL2	ENSEGOP00005008424	ENSEGOP00005013347	Uncharacterized protein.	Uncharacterized protein.	0.984
APPL1	DV515_00015291	ENSEGOP00005008424	ENSEGOP00005011427	Uncharacterized protein.	Uncharacterized protein.	0.541
APPL1	DV515_00016542	ENSEGOP00005008424	ENSEGOP00005020621	Uncharacterized protein.	Uncharacterized protein.	0.541
APPL1	INPP5B	ENSEGOP00005008424	ENSEGOP00005023270	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.557
APPL1	OCRL	ENSEGOP00005008424	ENSEGOP00005017176	Uncharacterized protein.	Rho-GAP domain-containing protein.	0.624
APPL1	RAB11A	ENSEGOP00005008424	ENSEGOP00005005653	Uncharacterized protein.	Uncharacterized protein.	0.541
APPL1	RAB20	ENSEGOP00005008424	ENSEGOP00005009760	Uncharacterized protein.	RAB20, member RAS oncogene family.	0.907
APPL1	RAB22A	ENSEGOP00005008424	ENSEGOP00005022964	Uncharacterized protein.	Uncharacterized protein.	0.907
APPL2	APPL1	ENSEGOP00005013347	ENSEGOP00005008424	Uncharacterized protein.	Uncharacterized protein.	0.984
APPL2	DV515_00015291	ENSEGOP00005013347	ENSEGOP00005011427	Uncharacterized protein.	Uncharacterized protein.	0.541
APPL2	DV515_00016542	ENSEGOP00005013347	ENSEGOP00005020621	Uncharacterized protein.	Uncharacterized protein.	0.541
APPL2	RAB11A	ENSEGOP00005013347	ENSEGOP00005005653	Uncharacterized protein.	Uncharacterized protein.	0.541
APPL2	RAB20	ENSEGOP00005013347	ENSEGOP00005009760	Uncharacterized protein.	RAB20, member RAS oncogene family.	0.907
APPL2	RAB22A	ENSEGOP00005013347	ENSEGOP00005022964	Uncharacterized protein.	Uncharacterized protein.	0.907
ATG14	AMBRA1	ENSEGOP00005014116	ENSEGOP00005001544	Uncharacterized protein.	Uncharacterized protein.	0.786
ATG14	PIK3C3	ENSEGOP00005014116	ENSEGOP00005014316	Uncharacterized protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.998
ATG14	UVRAG	ENSEGOP00005014116	ENSEGOP00005005997	Uncharacterized protein.	Uncharacterized protein.	0.634