56 items (Erythrura gouldiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PDLIM4	LIM zinc-binding domain-containing protein. (330 aa)
	LZTR1	Uncharacterized protein. (786 aa)
	ATP13A3	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1280 aa)
	ABHD17B	Abhydrolase domain containing 17B. (288 aa)
	DV515_00016917	Uncharacterized protein. (110 aa)
	DV515_00016542	Uncharacterized protein. (218 aa)
	RAP2C	Uncharacterized protein. (183 aa)
	PACSIN2	Uncharacterized protein. (485 aa)
	ABHD17A	Hydrolase_4 domain-containing protein. (306 aa)
	ENSEGOP00005023667	annotation not available (132 aa)
	NEU2	Sialidase domain-containing protein. (379 aa)
	ABHD17C	Abhydrolase domain containing 17C. (310 aa)
	ENSEGOP00005004077	annotation not available (752 aa)
	LAMP5	Uncharacterized protein. (272 aa)
	EHD3	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (535 aa)
	DV515_00001684	Uncharacterized protein. (294 aa)
	SORCS2	Sortilin related VPS10 domain containing receptor 2. (1032 aa)
	NSG1	Uncharacterized protein. (207 aa)
	EHD4	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (541 aa)
	VTI1B	t-SNARE coiled-coil homology domain-containing protein. (232 aa)
	NDRG1	Uncharacterized protein. (425 aa)
	SLC26A7	Anion exchange transporter. (642 aa)
	RAB12	Uncharacterized protein. (294 aa)
	ATG9B	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (854 aa)
	RAB11FIP3	Uncharacterized protein. (707 aa)
	SORL1	VPS10 domain-containing protein. (2214 aa)
	RAB11A	Uncharacterized protein. (216 aa)
	TPCN1	Uncharacterized protein. (817 aa)
	DV515_00005547	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (851 aa)
	DV515_00005613	Uncharacterized protein. (447 aa)
	DV515_00006674	Sialidase domain-containing protein. (343 aa)
	SLC1A1	Amino acid transporter. (522 aa)
	GRIA1	Uncharacterized protein. (902 aa)
	WASHC1	WH2 domain-containing protein. (476 aa)
	MICALL2	Uncharacterized protein. (797 aa)
	ARF6	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (147 aa)
	RAB11FIP4	FIP-RBD domain-containing protein. (630 aa)
	INPP4A	Uncharacterized protein. (905 aa)
	DV515_00015856	C2 domain-containing protein. (379 aa)
	DV515_00015291	Uncharacterized protein. (216 aa)
	SCAMP1	Secretory carrier-associated membrane protein. (339 aa)
	ENSEGOP00005011643	annotation not available (120 aa)
	DV515_00015369	Sialidase domain-containing protein. (489 aa)
	RAP2A	Uncharacterized protein. (183 aa)
	MICALL1	Uncharacterized protein. (938 aa)
	RAP2B	RAP2B, member of RAS oncogene family. (150 aa)
	CFTR	Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1485 aa)
	FZD7	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (573 aa)
	ZFYVE27	Uncharacterized protein. (408 aa)
	DV515_00009942	Uncharacterized protein. (682 aa)
	ENSEGOP00005014884	annotation not available (78 aa)
	SCAMP3	Secretory carrier-associated membrane protein. (337 aa)
	NTRK1	Tyrosine-protein kinase receptor. (812 aa)
	SCAMP4	Secretory carrier membrane protein 4. (229 aa)
	SCAMP5	Secretory carrier-associated membrane protein. (235 aa)
	SCAMP2	Secretory carrier-associated membrane protein. (339 aa)

Your Current Organism:

Erythrura gouldiae

NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARF6	DV515_00009942	ENSEGOP00005009360	ENSEGOP00005014878	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.879
ARF6	DV515_00015291	ENSEGOP00005009360	ENSEGOP00005011427	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.420
ARF6	DV515_00016542	ENSEGOP00005009360	ENSEGOP00005020621	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.420
ARF6	EHD3	ENSEGOP00005009360	ENSEGOP00005003622	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.435
ARF6	EHD4	ENSEGOP00005009360	ENSEGOP00005001426	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.435
ARF6	ENSEGOP00005014884	ENSEGOP00005009360	ENSEGOP00005014884	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	annotation not available	0.879
ARF6	RAB11A	ENSEGOP00005009360	ENSEGOP00005005653	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.420
ARF6	RAB11FIP3	ENSEGOP00005009360	ENSEGOP00005016539	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.741
ARF6	RAB11FIP4	ENSEGOP00005009360	ENSEGOP00005009552	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	FIP-RBD domain-containing protein.	0.546
ARF6	SCAMP2	ENSEGOP00005009360	ENSEGOP00005015770	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Secretory carrier-associated membrane protein.	0.464
ATG9B	DV515_00005547	ENSEGOP00005017687	ENSEGOP00005006215	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.472
CFTR	DV515_00015856	ENSEGOP00005013694	ENSEGOP00005011123	Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer.	C2 domain-containing protein.	0.436
CFTR	ENSEGOP00005011643	ENSEGOP00005013694	ENSEGOP00005011643	Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer.	annotation not available	0.436
DV515_00005547	ATG9B	ENSEGOP00005006215	ENSEGOP00005017687	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.472
DV515_00006674	ENSEGOP00005023667	ENSEGOP00005006748	ENSEGOP00005023667	Sialidase domain-containing protein.	annotation not available	0.435
DV515_00006674	NEU2	ENSEGOP00005006748	ENSEGOP00005019165	Sialidase domain-containing protein.	Sialidase domain-containing protein.	0.880
DV515_00009942	ARF6	ENSEGOP00005014878	ENSEGOP00005009360	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.879
DV515_00015291	ARF6	ENSEGOP00005011427	ENSEGOP00005009360	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.420
DV515_00015291	DV515_00016542	ENSEGOP00005011427	ENSEGOP00005020621	Uncharacterized protein.	Uncharacterized protein.	0.907
DV515_00015291	DV515_00016917	ENSEGOP00005011427	ENSEGOP00005020214	Uncharacterized protein.	Uncharacterized protein.	0.443