(55 nodes) Basal transcription factors network (Erythrura gouldiae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TAF4B	TAFH domain-containing protein. (730 aa)
	STON2	Uncharacterized protein. (886 aa)
	GTF2A1	Uncharacterized protein. (376 aa)
	TAF2	Uncharacterized protein. (1200 aa)
	TBPL1	TATA-box binding protein like 1. (183 aa)
	GTF2F2	TFIIF_beta domain-containing protein. (262 aa)
	GTF2H5	General transcription factor IIH subunit 5. (70 aa)
	MNAT1	MAT1 domain-containing protein. (309 aa)
	GTF2A1L	General transcription factor IIA subunit 1 like. (460 aa)
	GTF2H1	Uncharacterized protein. (548 aa)
	ING2	Inhibitor of growth protein. (286 aa)
	GTF2B	TFIIB-type domain-containing protein. (316 aa)
	DV515_00002762	HTH TFE/IIEalpha-type domain-containing protein. (422 aa)
	THAP12	THAP-type domain-containing protein. (701 aa)
	ERCC3	Uncharacterized protein. (778 aa)
	N6AMT1	MTS domain-containing protein. (264 aa)
	TAF3	Uncharacterized protein. (928 aa)
	SHISA9	Uncharacterized protein. (227 aa)
	ING1	Inhibitor of growth protein. (281 aa)
	CDK7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (343 aa)
	TAF5L	Uncharacterized protein. (589 aa)
	TBP	Uncharacterized protein. (300 aa)
	SGSM3	Uncharacterized protein. (760 aa)
	TAF7	TAFII55_N domain-containing protein. (336 aa)
	DV515_00010833	Transcription initiation factor TFIID subunit. (1919 aa)
	TAF15	Uncharacterized protein. (471 aa)
	ING3	Inhibitor of growth protein. (417 aa)
	DV515_00010909	Uncharacterized protein. (118 aa)
	TBPL2	TATA-box binding protein like 2. (164 aa)
	DV515_00009254	General transcription factor IIH subunit. (514 aa)
	STYX	Uncharacterized protein. (223 aa)
	GTF2E2	General transcription factor IIE subunit 2. (291 aa)
	DV515_00011346	Uncharacterized protein. (797 aa)
	DV515_00011286	Uncharacterized protein. (966 aa)
	DV515_00011345	Uncharacterized protein. (799 aa)
	DV515_00011349	Uncharacterized protein. (972 aa)
	IK	Uncharacterized protein. (501 aa)
	ING4	Inhibitor of growth protein. (249 aa)
	GTF2E1	HTH TFE/IIEalpha-type domain-containing protein. (442 aa)
	TAF13	Uncharacterized protein. (86 aa)
	TAF8	TAF8_C domain-containing protein. (247 aa)
	CCNH	CYCLIN domain-containing protein; Belongs to the cyclin family. (326 aa)
	ERI3	ERI1 exoribonuclease family member 3. (258 aa)
	TAF9	Uncharacterized protein. (253 aa)
	EBNA1BP2	Uncharacterized protein. (311 aa)
	DV515_00012298	TAFII28 domain-containing protein. (207 aa)
	TAF4	TAFH domain-containing protein. (1100 aa)
	GTF2H3	Uncharacterized protein. (307 aa)
	NELFCD	Uncharacterized protein. (598 aa)
	CLSPN	Uncharacterized protein. (1337 aa)
	TAF5	Uncharacterized protein. (783 aa)
	PDCD11	Uncharacterized protein. (1834 aa)
	D2HGDH	D-2-hydroxyglutarate dehydrogenase. (520 aa)
	ING5	Inhibitor of growth family member 5. (240 aa)
	GTF2A2	Uncharacterized protein. (109 aa)

Your Current Organism:

Erythrura gouldiae

NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCNH	CDK7	ENSEGOP00005020607	ENSEGOP00005011059	CYCLIN domain-containing protein; Belongs to the cyclin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.999
CCNH	DV515_00002762	ENSEGOP00005020607	ENSEGOP00005005206	CYCLIN domain-containing protein; Belongs to the cyclin family.	HTH TFE/IIEalpha-type domain-containing protein.	0.949
CCNH	DV515_00009254	ENSEGOP00005020607	ENSEGOP00005014172	CYCLIN domain-containing protein; Belongs to the cyclin family.	General transcription factor IIH subunit.	0.989
CCNH	DV515_00010833	ENSEGOP00005020607	ENSEGOP00005013402	CYCLIN domain-containing protein; Belongs to the cyclin family.	Transcription initiation factor TFIID subunit.	0.807
CCNH	DV515_00010909	ENSEGOP00005020607	ENSEGOP00005014108	CYCLIN domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.853
CCNH	DV515_00012298	ENSEGOP00005020607	ENSEGOP00005022170	CYCLIN domain-containing protein; Belongs to the cyclin family.	TAFII28 domain-containing protein.	0.849
CCNH	ERCC3	ENSEGOP00005020607	ENSEGOP00005006576	CYCLIN domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.990
CCNH	GTF2A1	ENSEGOP00005020607	ENSEGOP00005000736	CYCLIN domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.891
CCNH	GTF2A1L	ENSEGOP00005020607	ENSEGOP00005003754	CYCLIN domain-containing protein; Belongs to the cyclin family.	General transcription factor IIA subunit 1 like.	0.821
CCNH	GTF2A2	ENSEGOP00005020607	ENSEGOP00005023675	CYCLIN domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.939
CCNH	GTF2B	ENSEGOP00005020607	ENSEGOP00005005117	CYCLIN domain-containing protein; Belongs to the cyclin family.	TFIIB-type domain-containing protein.	0.951
CCNH	GTF2E1	ENSEGOP00005020607	ENSEGOP00005018976	CYCLIN domain-containing protein; Belongs to the cyclin family.	HTH TFE/IIEalpha-type domain-containing protein.	0.949
CCNH	GTF2E2	ENSEGOP00005020607	ENSEGOP00005014688	CYCLIN domain-containing protein; Belongs to the cyclin family.	General transcription factor IIE subunit 2.	0.990
CCNH	GTF2F2	ENSEGOP00005020607	ENSEGOP00005002440	CYCLIN domain-containing protein; Belongs to the cyclin family.	TFIIF_beta domain-containing protein.	0.909
CCNH	GTF2H1	ENSEGOP00005020607	ENSEGOP00005004034	CYCLIN domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.994
CCNH	GTF2H3	ENSEGOP00005020607	ENSEGOP00005022511	CYCLIN domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.997
CCNH	GTF2H5	ENSEGOP00005020607	ENSEGOP00005002567	CYCLIN domain-containing protein; Belongs to the cyclin family.	General transcription factor IIH subunit 5.	0.972
CCNH	MNAT1	ENSEGOP00005020607	ENSEGOP00005003699	CYCLIN domain-containing protein; Belongs to the cyclin family.	MAT1 domain-containing protein.	0.999
CCNH	TAF13	ENSEGOP00005020607	ENSEGOP00005019316	CYCLIN domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.857
CCNH	TAF15	ENSEGOP00005020607	ENSEGOP00005013476	CYCLIN domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.564