(16 nodes) Mixed, incl. DM13 domain, and Bromodomain, conserved site network (Nelumbo nucifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC104585795	Protein FAR1-RELATED SEQUENCE 5-like. (321 aa)
	LOC104589760	Protein FAR1-RELATED SEQUENCE 5-like. (262 aa)
	LOC104586012	Uncharacterized protein LOC104586012 isoform X1. (295 aa)
	LOC104588157	Protein FAR1-RELATED SEQUENCE 9-like. (390 aa)
	LOC104593553	Uncharacterized protein LOC104593553. (577 aa)
	LOC104597515	Uncharacterized protein LOC104597515 isoform X1. (382 aa)
	LOC104603110	Protein FAR1-RELATED SEQUENCE 5-like. (166 aa)
	LOC104602235	Protein FAR1-RELATED SEQUENCE 5-like. (118 aa)
	LOC104605198	Protein FAR1-RELATED SEQUENCE 5 isoform X1. (269 aa)
	LOC104603418	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830-like. (917 aa)
	LOC104605195	Protein FAR1-RELATED SEQUENCE 5-like. (256 aa)
	LOC104610954	Uncharacterized protein LOC104610954. (921 aa)
	LOC104612779	Uncharacterized protein LOC104612779. (911 aa)
	LOC104610697	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830. (913 aa)
	LOC104610912	Polyadenylate-binding protein-interacting protein 4 isoform X1. (572 aa)
	LOC109115728	Protein FAR1-RELATED SEQUENCE 5-like. (242 aa)

Your Current Organism:

Nelumbo nucifera

NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC104593553	LOC104603418	A0A1U7ZSD9	A0A1U8ASF5	Uncharacterized protein LOC104593553.	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830-like.	0.485
LOC104593553	LOC104610697	A0A1U7ZSD9	A0A1U8BGP6	Uncharacterized protein LOC104593553.	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830.	0.485
LOC104593553	LOC104610912	A0A1U7ZSD9	A0A1U8BHH0	Uncharacterized protein LOC104593553.	Polyadenylate-binding protein-interacting protein 4 isoform X1.	0.509
LOC104593553	LOC104610954	A0A1U7ZSD9	A0A1U8B901	Uncharacterized protein LOC104593553.	Uncharacterized protein LOC104610954.	0.406
LOC104593553	LOC104612779	A0A1U7ZSD9	A0A1U8BF67	Uncharacterized protein LOC104593553.	Uncharacterized protein LOC104612779.	0.406
LOC104603418	LOC104593553	A0A1U8ASF5	A0A1U7ZSD9	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830-like.	Uncharacterized protein LOC104593553.	0.485
LOC104603418	LOC104610954	A0A1U8ASF5	A0A1U8B901	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830-like.	Uncharacterized protein LOC104610954.	0.435
LOC104603418	LOC104612779	A0A1U8ASF5	A0A1U8BF67	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830-like.	Uncharacterized protein LOC104612779.	0.435
LOC104610697	LOC104593553	A0A1U8BGP6	A0A1U7ZSD9	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830.	Uncharacterized protein LOC104593553.	0.485
LOC104610697	LOC104610954	A0A1U8BGP6	A0A1U8B901	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830.	Uncharacterized protein LOC104610954.	0.435
LOC104610697	LOC104612779	A0A1U8BGP6	A0A1U8BF67	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830.	Uncharacterized protein LOC104612779.	0.435
LOC104610912	LOC104593553	A0A1U8BHH0	A0A1U7ZSD9	Polyadenylate-binding protein-interacting protein 4 isoform X1.	Uncharacterized protein LOC104593553.	0.509
LOC104610954	LOC104593553	A0A1U8B901	A0A1U7ZSD9	Uncharacterized protein LOC104610954.	Uncharacterized protein LOC104593553.	0.406
LOC104610954	LOC104603418	A0A1U8B901	A0A1U8ASF5	Uncharacterized protein LOC104610954.	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830-like.	0.435
LOC104610954	LOC104610697	A0A1U8B901	A0A1U8BGP6	Uncharacterized protein LOC104610954.	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830.	0.435
LOC104612779	LOC104593553	A0A1U8BF67	A0A1U7ZSD9	Uncharacterized protein LOC104612779.	Uncharacterized protein LOC104593553.	0.406
LOC104612779	LOC104603418	A0A1U8BF67	A0A1U8ASF5	Uncharacterized protein LOC104612779.	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830-like.	0.435
LOC104612779	LOC104610697	A0A1U8BF67	A0A1U8BGP6	Uncharacterized protein LOC104612779.	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830.	0.435