(5 nodes) BED zinc finger, and DDE transposase sub-family network (Nelumbo nucifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC104586131	Zinc finger BED domain-containing protein RICESLEEPER 2-like. (675 aa)
	LOC104586161	Uncharacterized protein LOC104586161 isoform X1. (867 aa)
	LOC104592503	Protein FAR1-RELATED SEQUENCE 6. (657 aa)
	LOC104597471	Protein FAR1-RELATED SEQUENCE 5-like isoform X1. (787 aa)
	LOC104601077	Uncharacterized protein LOC104601077. (751 aa)

Your Current Organism:

Nelumbo nucifera

NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC104586131	LOC104586161	A0A1U7YNN4	A0A1U7YRJ7	Zinc finger BED domain-containing protein RICESLEEPER 2-like.	Uncharacterized protein LOC104586161 isoform X1.	0.505
LOC104586131	LOC104592503	A0A1U7YNN4	A0A1U7ZNM9	Zinc finger BED domain-containing protein RICESLEEPER 2-like.	Protein FAR1-RELATED SEQUENCE 6.	0.445
LOC104586131	LOC104597471	A0A1U7YNN4	A0A1U7ZYB9	Zinc finger BED domain-containing protein RICESLEEPER 2-like.	Protein FAR1-RELATED SEQUENCE 5-like isoform X1.	0.472
LOC104586131	LOC104601077	A0A1U7YNN4	A0A1U8A5T0	Zinc finger BED domain-containing protein RICESLEEPER 2-like.	Uncharacterized protein LOC104601077.	0.578
LOC104586161	LOC104586131	A0A1U7YRJ7	A0A1U7YNN4	Uncharacterized protein LOC104586161 isoform X1.	Zinc finger BED domain-containing protein RICESLEEPER 2-like.	0.505
LOC104586161	LOC104592503	A0A1U7YRJ7	A0A1U7ZNM9	Uncharacterized protein LOC104586161 isoform X1.	Protein FAR1-RELATED SEQUENCE 6.	0.526
LOC104586161	LOC104597471	A0A1U7YRJ7	A0A1U7ZYB9	Uncharacterized protein LOC104586161 isoform X1.	Protein FAR1-RELATED SEQUENCE 5-like isoform X1.	0.513
LOC104586161	LOC104601077	A0A1U7YRJ7	A0A1U8A5T0	Uncharacterized protein LOC104586161 isoform X1.	Uncharacterized protein LOC104601077.	0.521
LOC104592503	LOC104586131	A0A1U7ZNM9	A0A1U7YNN4	Protein FAR1-RELATED SEQUENCE 6.	Zinc finger BED domain-containing protein RICESLEEPER 2-like.	0.445
LOC104592503	LOC104586161	A0A1U7ZNM9	A0A1U7YRJ7	Protein FAR1-RELATED SEQUENCE 6.	Uncharacterized protein LOC104586161 isoform X1.	0.526
LOC104592503	LOC104601077	A0A1U7ZNM9	A0A1U8A5T0	Protein FAR1-RELATED SEQUENCE 6.	Uncharacterized protein LOC104601077.	0.465
LOC104597471	LOC104586131	A0A1U7ZYB9	A0A1U7YNN4	Protein FAR1-RELATED SEQUENCE 5-like isoform X1.	Zinc finger BED domain-containing protein RICESLEEPER 2-like.	0.472
LOC104597471	LOC104586161	A0A1U7ZYB9	A0A1U7YRJ7	Protein FAR1-RELATED SEQUENCE 5-like isoform X1.	Uncharacterized protein LOC104586161 isoform X1.	0.513
LOC104597471	LOC104601077	A0A1U7ZYB9	A0A1U8A5T0	Protein FAR1-RELATED SEQUENCE 5-like isoform X1.	Uncharacterized protein LOC104601077.	0.531
LOC104601077	LOC104586131	A0A1U8A5T0	A0A1U7YNN4	Uncharacterized protein LOC104601077.	Zinc finger BED domain-containing protein RICESLEEPER 2-like.	0.578
LOC104601077	LOC104586161	A0A1U8A5T0	A0A1U7YRJ7	Uncharacterized protein LOC104601077.	Uncharacterized protein LOC104586161 isoform X1.	0.521
LOC104601077	LOC104592503	A0A1U8A5T0	A0A1U7ZNM9	Uncharacterized protein LOC104601077.	Protein FAR1-RELATED SEQUENCE 6.	0.465
LOC104601077	LOC104597471	A0A1U8A5T0	A0A1U7ZYB9	Uncharacterized protein LOC104601077.	Protein FAR1-RELATED SEQUENCE 5-like isoform X1.	0.531