16 items (Nelumbo nucifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC104588772	Ornithine aminotransferase. (282 aa)
	LOC104606370	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
	LOC104611053	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (495 aa)
	LOC104609813	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
	LOC104611981	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. (211 aa)
	LOC104602046	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. (720 aa)
	LOC104600582	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (498 aa)
	LOC104597806	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (495 aa)
	LOC104597678	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
	LOC104590439	Ornithine aminotransferase. (122 aa)
	LOC104589582	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (494 aa)
	LOC104586749	Probable aldehyde dehydrogenase. (555 aa)
	LOC104608307	Uncharacterized protein LOC104608307. (362 aa)
	LOC104611147	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
	LOC104611028	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (495 aa)
	LOC104607502	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. (721 aa)

Your Current Organism:

Nelumbo nucifera

NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC104586749	LOC104588772	A0A1U7YTD3	A0A1U7ZCT7	Probable aldehyde dehydrogenase.	Ornithine aminotransferase.	0.972
LOC104586749	LOC104589582	A0A1U7YTD3	A0A1U7ZE65	Probable aldehyde dehydrogenase.	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	0.944
LOC104586749	LOC104590439	A0A1U7YTD3	A0A1U7ZGX5	Probable aldehyde dehydrogenase.	Ornithine aminotransferase.	0.591
LOC104586749	LOC104597678	A0A1U7YTD3	A0A1U7ZTL9	Probable aldehyde dehydrogenase.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.935
LOC104586749	LOC104597806	A0A1U7YTD3	A0A1U7ZTZ2	Probable aldehyde dehydrogenase.	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.	0.968
LOC104586749	LOC104600582	A0A1U7YTD3	A0A1U8A9R3	Probable aldehyde dehydrogenase.	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.	0.968
LOC104586749	LOC104606370	A0A1U7YTD3	A0A1U8B2F8	Probable aldehyde dehydrogenase.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.935
LOC104586749	LOC104608307	A0A1U7YTD3	A0A1U8AWZ3	Probable aldehyde dehydrogenase.	Uncharacterized protein LOC104608307.	0.591
LOC104586749	LOC104609813	A0A1U7YTD3	A0A1U8BDR7	Probable aldehyde dehydrogenase.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.935
LOC104586749	LOC104611028	A0A1U7YTD3	A0A1U8B5R3	Probable aldehyde dehydrogenase.	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	0.944
LOC104586749	LOC104611053	A0A1U7YTD3	A0A1U8BHY5	Probable aldehyde dehydrogenase.	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	0.944
LOC104586749	LOC104611147	A0A1U7YTD3	A0A1U8B633	Probable aldehyde dehydrogenase.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.935
LOC104588772	LOC104586749	A0A1U7ZCT7	A0A1U7YTD3	Ornithine aminotransferase.	Probable aldehyde dehydrogenase.	0.972
LOC104588772	LOC104590439	A0A1U7ZCT7	A0A1U7ZGX5	Ornithine aminotransferase.	Ornithine aminotransferase.	0.817
LOC104588772	LOC104597678	A0A1U7ZCT7	A0A1U7ZTL9	Ornithine aminotransferase.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.541
LOC104588772	LOC104597806	A0A1U7ZCT7	A0A1U7ZTZ2	Ornithine aminotransferase.	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.	0.740
LOC104588772	LOC104600582	A0A1U7ZCT7	A0A1U8A9R3	Ornithine aminotransferase.	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.	0.740
LOC104588772	LOC104606370	A0A1U7ZCT7	A0A1U8B2F8	Ornithine aminotransferase.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.541
LOC104588772	LOC104609813	A0A1U7ZCT7	A0A1U8BDR7	Ornithine aminotransferase.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.541
LOC104588772	LOC104611147	A0A1U7ZCT7	A0A1U8B633	Ornithine aminotransferase.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.541