(27 nodes) High mobility group box domain superfamily network (Nelumbo nucifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC104603688	High mobility group B protein 9-like. (346 aa)
	LOC104603771	HMG1/2-like protein. (155 aa)
	LOC104607805	HMG1/2-like protein. (155 aa)
	LOC104604329	High mobility group B protein 9-like isoform X1. (338 aa)
	LOC104609423	High mobility group B protein 15-like isoform X1. (442 aa)
	LOC104610200	High mobility group B protein 14. (157 aa)
	LOC104612845	Uncharacterized protein LOC104612845 isoform X1. (547 aa)
	LOC104594536	High mobility group B protein 7. (208 aa)
	LOC104585948	High mobility group B protein 14-like. (91 aa)
	LOC104586741	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (639 aa)
	LOC104586000	High mobility group B protein 15-like. (674 aa)
	LOC104590214	HMG1/2-like protein. (155 aa)
	LOC104591412	Axial regulator YABBY 4. (193 aa)
	LOC104592455	Axial regulator YABBY 5-like isoform X1. (197 aa)
	LOC104590803	Putative axial regulator YABBY 2 isoform X1. (184 aa)
	LOC104595013	High mobility group B protein 1-like isoform X1. (209 aa)
	LOC104591676	High mobility group B protein 7-like. (195 aa)
	LOC104594344	High mobility group B protein 10. (333 aa)
	LOC104595406	Axial regulator YABBY 5-like. (184 aa)
	LOC104597892	Protein CRABS CLAW-like isoform X1. (187 aa)
	LOC104601253	High mobility group B protein 1-like. (166 aa)
	LOC104598581	Protein YABBY 4-like. (211 aa)
	LOC104602291	Protein YABBY 4-like. (211 aa)
	LOC104599733	Protein CRABS CLAW-like isoform X1. (187 aa)
	LOC104603963	High mobility group B protein 6-like. (553 aa)
	LOC104601443	Putative axial regulator YABBY 2 isoform X1. (184 aa)
	LOC104604975	High mobility group B protein 3-like. (150 aa)

Your Current Organism:

Nelumbo nucifera

NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC104585948	LOC104586741	A0A1U8QBJ5	A0A1U7YTC4	High mobility group B protein 14-like.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.534
LOC104585948	LOC104591676	A0A1U8QBJ5	A0A1U7ZLZ8	High mobility group B protein 14-like.	High mobility group B protein 7-like.	0.416
LOC104586000	LOC104586741	A0A1U7Z2D9	A0A1U7YTC4	High mobility group B protein 15-like.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.563
LOC104586000	LOC104594344	A0A1U7Z2D9	A0A1U7ZMF3	High mobility group B protein 15-like.	High mobility group B protein 10.	0.761
LOC104586000	LOC104603688	A0A1U7Z2D9	A0A1U8ASL4	High mobility group B protein 15-like.	High mobility group B protein 9-like.	0.761
LOC104586000	LOC104604329	A0A1U7Z2D9	A0A1U8AUS5	High mobility group B protein 15-like.	High mobility group B protein 9-like isoform X1.	0.760
LOC104586000	LOC104609423	A0A1U7Z2D9	A0A1U8B3Y2	High mobility group B protein 15-like.	High mobility group B protein 15-like isoform X1.	0.759
LOC104586741	LOC104585948	A0A1U7YTC4	A0A1U8QBJ5	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	High mobility group B protein 14-like.	0.534
LOC104586741	LOC104586000	A0A1U7YTC4	A0A1U7Z2D9	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	High mobility group B protein 15-like.	0.563
LOC104586741	LOC104590214	A0A1U7YTC4	A0A1U7Z4F5	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	HMG1/2-like protein.	0.560
LOC104586741	LOC104591676	A0A1U7YTC4	A0A1U7ZLZ8	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	High mobility group B protein 7-like.	0.502
LOC104586741	LOC104594344	A0A1U7YTC4	A0A1U7ZMF3	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	High mobility group B protein 10.	0.563
LOC104586741	LOC104595013	A0A1U7YTC4	A0A1U7ZKY2	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	High mobility group B protein 1-like isoform X1.	0.502
LOC104586741	LOC104601253	A0A1U7YTC4	A0A1U8A6H3	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	High mobility group B protein 1-like.	0.502
LOC104586741	LOC104603688	A0A1U7YTC4	A0A1U8ASL4	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	High mobility group B protein 9-like.	0.563
LOC104586741	LOC104603771	A0A1U7YTC4	A0A1U8ATJ2	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	HMG1/2-like protein.	0.502
LOC104586741	LOC104603963	A0A1U7YTC4	A0A1U8AH51	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	High mobility group B protein 6-like.	0.502
LOC104586741	LOC104604329	A0A1U7YTC4	A0A1U8AUS5	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	High mobility group B protein 9-like isoform X1.	0.563
LOC104586741	LOC104604975	A0A1U7YTC4	A0A1U8ANV9	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	High mobility group B protein 3-like.	0.502
LOC104586741	LOC104607805	A0A1U7YTC4	A0A1U8AUP3	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	HMG1/2-like protein.	0.502