(5 nodes) HMGB9-like, ARID/BRIGHT DNA binding domain network (Nelumbo nucifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC104594344	High mobility group B protein 10. (333 aa)
	LOC104586000	High mobility group B protein 15-like. (674 aa)
	LOC104609423	High mobility group B protein 15-like isoform X1. (442 aa)
	LOC104604329	High mobility group B protein 9-like isoform X1. (338 aa)
	LOC104603688	High mobility group B protein 9-like. (346 aa)

Your Current Organism:

Nelumbo nucifera

NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC104586000	LOC104594344	A0A1U7Z2D9	A0A1U7ZMF3	High mobility group B protein 15-like.	High mobility group B protein 10.	0.761
LOC104586000	LOC104603688	A0A1U7Z2D9	A0A1U8ASL4	High mobility group B protein 15-like.	High mobility group B protein 9-like.	0.761
LOC104586000	LOC104604329	A0A1U7Z2D9	A0A1U8AUS5	High mobility group B protein 15-like.	High mobility group B protein 9-like isoform X1.	0.760
LOC104586000	LOC104609423	A0A1U7Z2D9	A0A1U8B3Y2	High mobility group B protein 15-like.	High mobility group B protein 15-like isoform X1.	0.759
LOC104594344	LOC104586000	A0A1U7ZMF3	A0A1U7Z2D9	High mobility group B protein 10.	High mobility group B protein 15-like.	0.761
LOC104594344	LOC104603688	A0A1U7ZMF3	A0A1U8ASL4	High mobility group B protein 10.	High mobility group B protein 9-like.	0.765
LOC104594344	LOC104604329	A0A1U7ZMF3	A0A1U8AUS5	High mobility group B protein 10.	High mobility group B protein 9-like isoform X1.	0.764
LOC104594344	LOC104609423	A0A1U7ZMF3	A0A1U8B3Y2	High mobility group B protein 10.	High mobility group B protein 15-like isoform X1.	0.762
LOC104603688	LOC104586000	A0A1U8ASL4	A0A1U7Z2D9	High mobility group B protein 9-like.	High mobility group B protein 15-like.	0.761
LOC104603688	LOC104594344	A0A1U8ASL4	A0A1U7ZMF3	High mobility group B protein 9-like.	High mobility group B protein 10.	0.765
LOC104603688	LOC104604329	A0A1U8ASL4	A0A1U8AUS5	High mobility group B protein 9-like.	High mobility group B protein 9-like isoform X1.	0.759
LOC104603688	LOC104609423	A0A1U8ASL4	A0A1U8B3Y2	High mobility group B protein 9-like.	High mobility group B protein 15-like isoform X1.	0.763
LOC104604329	LOC104586000	A0A1U8AUS5	A0A1U7Z2D9	High mobility group B protein 9-like isoform X1.	High mobility group B protein 15-like.	0.760
LOC104604329	LOC104594344	A0A1U8AUS5	A0A1U7ZMF3	High mobility group B protein 9-like isoform X1.	High mobility group B protein 10.	0.764
LOC104604329	LOC104603688	A0A1U8AUS5	A0A1U8ASL4	High mobility group B protein 9-like isoform X1.	High mobility group B protein 9-like.	0.759
LOC104604329	LOC104609423	A0A1U8AUS5	A0A1U8B3Y2	High mobility group B protein 9-like isoform X1.	High mobility group B protein 15-like isoform X1.	0.762
LOC104609423	LOC104586000	A0A1U8B3Y2	A0A1U7Z2D9	High mobility group B protein 15-like isoform X1.	High mobility group B protein 15-like.	0.759
LOC104609423	LOC104594344	A0A1U8B3Y2	A0A1U7ZMF3	High mobility group B protein 15-like isoform X1.	High mobility group B protein 10.	0.762
LOC104609423	LOC104603688	A0A1U8B3Y2	A0A1U8ASL4	High mobility group B protein 15-like isoform X1.	High mobility group B protein 9-like.	0.763
LOC104609423	LOC104604329	A0A1U8B3Y2	A0A1U8AUS5	High mobility group B protein 15-like isoform X1.	High mobility group B protein 9-like isoform X1.	0.762