(29 nodes) Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity network (Streptomyces sp. CNQ509)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AKH80872.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)
	AKH80873.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
	AKH86461.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
	AKH81848.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
	AKH81849.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
	AKH81850.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
	AKH86612.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
	AKH82236.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
	AKH86613.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
	AKH82310.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
	AKH82311.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
	AKH82312.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)
	AKH82576.1	Sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)
	AKH82577.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
	AKH82578.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)
	AKH83063.1	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (378 aa)
	AKH84041.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)
	AKH84064.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
	AKH84065.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
	AKH84066.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
	AKH84564.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (569 aa)
	AKH84707.1	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
	AKH84708.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
	AKH84709.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
	AKH85706.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
	AKH85707.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
	AKH85708.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
	AKH85886.1	Sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)
	AKH86326.1	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (456 aa)

Your Current Organism:

Streptomyces sp. CNQ509

NCBI taxonomy Id: 444103
Other names: S. sp. CNQ-509, Streptomyces sp. CNQ-509

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKH80872.1	AKH80873.1	AA958_00350	AA958_00355	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
AKH80872.1	AKH81848.1	AA958_00350	AA958_06100	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.456
AKH80872.1	AKH81849.1	AA958_00350	AA958_06105	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.466
AKH80872.1	AKH82236.1	AA958_00350	AA958_08325	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.836
AKH80872.1	AKH83063.1	AA958_00350	AA958_13420	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.493
AKH80872.1	AKH84065.1	AA958_00350	AA958_19875	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.407
AKH80872.1	AKH84066.1	AA958_00350	AA958_19880	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.407
AKH80872.1	AKH84708.1	AA958_00350	AA958_23675	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.542
AKH80872.1	AKH84709.1	AA958_00350	AA958_23680	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.481
AKH80872.1	AKH86326.1	AA958_00350	AA958_33480	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.493
AKH80872.1	AKH86461.1	AA958_00350	AA958_00360	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.866
AKH80872.1	AKH86612.1	AA958_00350	AA958_08320	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.818
AKH80873.1	AKH80872.1	AA958_00355	AA958_00350	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
AKH80873.1	AKH81848.1	AA958_00355	AA958_06100	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.518
AKH80873.1	AKH81850.1	AA958_00355	AA958_06110	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
AKH80873.1	AKH82310.1	AA958_00355	AA958_08805	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
AKH80873.1	AKH82312.1	AA958_00355	AA958_08815	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.625
AKH80873.1	AKH82578.1	AA958_00355	AA958_10465	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.672
AKH80873.1	AKH83063.1	AA958_00355	AA958_13420	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.796
AKH80873.1	AKH84041.1	AA958_00355	AA958_19745	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815