(10 nodes) Mixed, incl. Fibronectin type III-like domain, and Bacterial regulatory proteins, lacI family network (Streptomyces sp. CNQ509)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AKH85724.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
	AKH85725.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
	AKH87127.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)
	AKH85726.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family. (806 aa)
	AKH85727.1	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	AKH87176.1	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
	AKH86025.1	Sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
	AKH86026.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
	AKH86027.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
	AKH87177.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (808 aa)

Your Current Organism:

Streptomyces sp. CNQ509

NCBI taxonomy Id: 444103
Other names: S. sp. CNQ-509, Streptomyces sp. CNQ-509

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKH85724.1	AKH85725.1	AA958_29800	AA958_29805	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
AKH85724.1	AKH85726.1	AA958_29800	AA958_29815	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	0.608
AKH85724.1	AKH85727.1	AA958_29800	AA958_29820	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
AKH85724.1	AKH86025.1	AA958_29800	AA958_31695	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.813
AKH85724.1	AKH86026.1	AA958_29800	AA958_31700	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.855
AKH85724.1	AKH87127.1	AA958_29800	AA958_29810	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963
AKH85725.1	AKH85724.1	AA958_29805	AA958_29800	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
AKH85725.1	AKH85726.1	AA958_29805	AA958_29815	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	0.631
AKH85725.1	AKH85727.1	AA958_29805	AA958_29820	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.579
AKH85725.1	AKH86025.1	AA958_29805	AA958_31695	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.827
AKH85725.1	AKH86027.1	AA958_29805	AA958_31705	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.854
AKH85725.1	AKH87127.1	AA958_29805	AA958_29810	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.962
AKH85726.1	AKH85724.1	AA958_29815	AA958_29800	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.608
AKH85726.1	AKH85725.1	AA958_29815	AA958_29805	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.631
AKH85726.1	AKH85727.1	AA958_29815	AA958_29820	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.812
AKH85726.1	AKH87127.1	AA958_29815	AA958_29810	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.670
AKH85727.1	AKH85724.1	AA958_29820	AA958_29800	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
AKH85727.1	AKH85725.1	AA958_29820	AA958_29805	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.579
AKH85727.1	AKH85726.1	AA958_29820	AA958_29815	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	0.812
AKH85727.1	AKH87127.1	AA958_29820	AA958_29810	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.594