Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKH81585.1 | AKH84632.1 | AA958_04565 | AA958_23235 | Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-succinyldiaminopimelate aminotransferase; Catalyzes the formation of N-succinyl-LL-2,6-diaminopimelate from N-succinyl-L-2-amino-6-oxopimelate in lysine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
| AKH81585.1 | AKH86934.1 | AA958_04565 | AA958_21005 | Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.910 |
| AKH81726.1 | AKH86934.1 | AA958_05400 | AA958_21005 | Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.909 |
| AKH81726.1 | hisC | AA958_05400 | AA958_06390 | Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.928 |
| AKH81726.1 | pat | AA958_05400 | AA958_15940 | Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | 0.917 |
| AKH84389.1 | AKH86051.1 | AA958_21780 | AA958_31860 | GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.432 |
| AKH84497.1 | AKH86934.1 | AA958_22430 | AA958_21005 | Aminotransferase; Broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AKH84632.1 | AKH81585.1 | AA958_23235 | AA958_04565 | N-succinyldiaminopimelate aminotransferase; Catalyzes the formation of N-succinyl-LL-2,6-diaminopimelate from N-succinyl-L-2-amino-6-oxopimelate in lysine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
| AKH84632.1 | hisC | AA958_23235 | AA958_06390 | N-succinyldiaminopimelate aminotransferase; Catalyzes the formation of N-succinyl-LL-2,6-diaminopimelate from N-succinyl-L-2-amino-6-oxopimelate in lysine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.403 |
| AKH86051.1 | AKH84389.1 | AA958_31860 | AA958_21780 | GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.432 |
| AKH86934.1 | AKH81585.1 | AA958_21005 | AA958_04565 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.910 |
| AKH86934.1 | AKH81726.1 | AA958_21005 | AA958_05400 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.909 |
| AKH86934.1 | AKH84497.1 | AA958_21005 | AA958_22430 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aminotransferase; Broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AKH86934.1 | hisC | AA958_21005 | AA958_06390 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.909 |
| AKH86934.1 | pat | AA958_21005 | AA958_15940 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | 0.923 |
| hisC | AKH81726.1 | AA958_06390 | AA958_05400 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| hisC | AKH84632.1 | AA958_06390 | AA958_23235 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | N-succinyldiaminopimelate aminotransferase; Catalyzes the formation of N-succinyl-LL-2,6-diaminopimelate from N-succinyl-L-2-amino-6-oxopimelate in lysine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.403 |
| hisC | AKH86934.1 | AA958_06390 | AA958_21005 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.909 |
| hisC | pat | AA958_06390 | AA958_15940 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | 0.913 |
| pat | AKH81726.1 | AA958_15940 | AA958_05400 | Aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.917 |
page 1 of 2